| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g20995 | 3:1,725,340-1,727,304 | - | C2H3g08230 | CX3g031140 | LOC_Os03g04120 | Os03g0133500 | - | Detail |
| C1H3g14010 | 3:1,729,023-1,736,073 | - | C2H3g28117 | CX3g028134 | LOC_Os03g04130 | Os03g0133800 | - | Detail |
| C1H3g08215 | 3:1,737,119-1,737,342 | - | C2H3g06102 | - | - | Os03g0130350 | - | Detail |
| C1H3g28278 | 3:1,737,623-1,742,154 | - | C2H3g18012 | CX3g028998 | LOC_Os03g04140 | Os03g0133900 | OsSAT3 | Detail |
| C1H3g03246 | 3:1,745,367-1,749,711 | + | C2H3g09036 | CX3g030226 | LOC_Os03g04169 | Os03g0134300 | - | Detail |
| C1H3g21430 | 3:1,750,410-1,752,390 | - | C2H3g27438 | CX3g030747 | LOC_Os03g04190 | Os03g0134500 | - | Detail |
| C1H3g21849 | 3:1,763,648-1,764,644 | + | C2H3g12826 | CX3g028352 | LOC_Os03g04210 | Os03g0134800 | - | Detail |
| C1H3g16924 | 3:1,765,183-1,766,649 | - | C2H3g04770 | CX3g027728 | LOC_Os03g04220 | Os03g0134900 | - | Detail |
| C1H3g04141 | 3:1,771,450-1,772,677 | - | C2H3g23886 | CX3g027728 | LOC_Os03g04240 | Os03g0135100 | - | Detail |
| C1H3g09964 | 3:1,774,847-1,775,695 | - | C2H3g23080 | CX3g027728 | LOC_Os03g04250 | Os03g0135200 | - | Detail |
| C1H3g28981 | 3:1,777,212-1,778,164 | - | C2H3g08307 | CX3g027728 | LOC_Os03g04260 | Os03g0135300 | - | Detail |
| C1H3g07565 | 3:1,780,257-1,783,136 | - | C2H3g10421 | CX3g030799 | LOC_Os03g04270 | Os03g0135400 | - | Detail |
| C1H3g05387 | 3:1,788,750-1,797,550 | - | C2H3g21011 | CX3g025620 | LOC_Os03g04300 | Os03g0135600 | - | Detail |
| C1H3g28124 | 3:1,801,590-1,803,552 | - | C2H3g13535 | CX3g028533 | LOC_Os03g04310 | Os03g0135700 | - | Detail |
| C1H3g08465 | 3:1,808,577-1,810,150 | - | - | - | LOC_Os03g04320 | - | - | Detail |
| C1H3g13645 | 3:1,810,238-1,814,005 | - | C2H3g10458 | - | LOC_Os03g04320 | Os03g0135800 | - | Detail |
| C1H3g26367 | 3:1,820,654-1,821,745 | + | C2H3g08967 | CX3g028470 | LOC_Os03g04340 | Os03g0136200 | - | Detail |
| C1H3g15385 | 3:1,828,694-1,830,274 | - | C2H3g15188 | CX3g025886 | LOC_Os03g04360 | Os03g0136400 | OsPHT1;7 | Detail |
| C1H3g19324 | 3:1,831,041-1,831,463 | + | C2H3g08585 | - | LOC_Os03g04370 | Os03g0136500 | - | Detail |
| C1H3g07268 | 3:1,831,816-1,832,298 | + | C2H3g18976 | CX3g030982 | LOC_Os03g04380 | Os03g0136600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047448 | 7:2,351,822-2,353,600 | - | C1H7g28014 | C2H7g05371 | LOC_Os07g05560 | Os07g0150000 | - | Detail |
| CX7g046128 | 7:2,354,295-2,358,931 | - | C1H7g24736 | C2H7g11076 | LOC_Os07g05570 | Os07g0150100 | - | Detail |
| CX7g046928 | 7:2,359,906-2,360,070 | - | - | - | - | Os07g0596950 | - | Detail |
| CX7g049041 | 7:2,365,079-2,367,041 | + | C1H7g04309 | C2H7g01613 | LOC_Os07g05580 | Os07g0150200 | - | Detail |
| CX7g048722 | 7:2,374,371-2,374,604 | - | - | - | - | - | - | Detail |
| CX7g049185 | 7:2,387,784-2,388,233 | + | - | C2H7g28166 | - | - | - | Detail |
| CX7g048419 | 7:2,394,886-2,400,706 | - | C1H7g20992 | C2H7g23215 | LOC_Os07g05610 | Os07g0150500 | - | Detail |
| CX7g046244 | 7:2,402,141-2,402,623 | + | C1H4g05987 | C2H7g26391 | - | - | - | Detail |
| CX7g049123 | 7:2,405,498-2,409,545 | - | C1H7g11750 | C2H7g21271 | LOC_Os07g05620 | Os07g0150700 | CIPK23, OsCIPK23, Os-CIPK23 | Detail |
| CX7g050005 | 7:2,439,450-2,439,680 | - | - | C2H7g09771 | - | Os07g0150901 | - | Detail |
| CX7g049063 | 7:2,445,494-2,445,685 | + | - | - | - | Os07g0596950 | - | Detail |
| CX7g047271 | 7:2,451,187-2,451,423 | - | - | - | - | - | - | Detail |
| CX7g046437 | 7:2,455,154-2,455,741 | + | - | C2H7g02050 | LOC_Os07g05630 | Os07g0151100 | MIL1, mil1 | Detail |
| CX7g048161 | 7:2,459,748-2,460,655 | + | - | C2H7g18704 | - | - | - | Detail |
| CX7g046612 | 7:2,464,951-2,467,937 | + | C1H7g30095 | C2H7g08918 | LOC_Os07g05640 | Os07g0151200 | OsINT2 | Detail |
| CX7g046240 | 7:2,469,215-2,470,269 | + | C1H7g19810 | C2H7g00952 | LOC_Os07g05650 | Os07g0151300 | - | Detail |
| CX7g049717 | 7:2,503,834-2,504,998 | + | C1H7g16809 | C2H7g27358 | LOC_Os07g05690 | Os07g0151700 | - | Detail |
| CX7g050150 | 7:2,522,243-2,522,485 | - | - | - | - | Os07g0137500 | - | Detail |
| CX7g047890 | 7:2,539,275-2,540,615 | + | C1H7g23187 | C2H7g13193 | LOC_Os07g05720 | Os07g0152000 | OsTCP21, TCP21 | Detail |
| CX7g047180 | 7:2,546,689-2,550,187 | - | C1H7g21805 | C2H7g03119 | LOC_Os07g05740 | Os07g0152200 | - | Detail |