| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g06281 | 7:2,870,934-2,884,230 | - | C2H7g15677 | CX7g049022 | LOC_Os07g06890 | Os07g0163000 | OsD-LDH, D-LDH, OsD-LDH-Tr | Detail |
| C1H7g10831 | 7:2,883,733-2,884,255 | + | - | - | - | Os07g0163066 | - | Detail |
| C1H7g03136 | 7:2,887,002-2,889,311 | - | C2H7g11414 | CX7g046953 | LOC_Os07g06900 | Os07g0163200 | - | Detail |
| C1H7g06104 | 7:2,892,038-2,893,416 | - | C2H7g28250 | CX7g050145 | LOC_Os07g06910 | - | - | Detail |
| C1H7g10635 | 7:2,906,228-2,918,414 | + | C2H7g28897 | CX7g047813 | LOC_Os07g06940 | Os07g0163500 | WP1, OsValRS2, ValRS2 | Detail |
| C1H7g30562 | 7:2,926,314-2,938,047 | + | C2H7g16342 | CX7g047695 | LOC_Os07g06950 | Os07g0163800 | - | Detail |
| C1H7g13389 | 7:2,942,767-2,948,162 | - | C2H7g12803 | CX7g046501 | LOC_Os07g06970 | Os07g0164000 | WAF1, waf1, waf1-1, waf1-2, HEN1 | Detail |
| C1H7g24937 | 7:2,949,503-2,958,519 | - | C2H7g02116 | CX7g046855 | LOC_Os07g06980 | Os07g0164100 | HDA704 | Detail |
| C1H7g12322 | 7:2,958,769-2,959,858 | + | C2H7g16406 | CX7g048709 | LOC_Os07g06990 | Os07g0164200 | - | Detail |
| C1H7g16672 | 7:2,959,938-2,963,936 | - | C2H7g19812 | CX7g048627 | LOC_Os07g07000 | Os07g0164300 | OsSYP131a | Detail |
| C1H7g03242 | 7:2,966,683-2,969,912 | + | C2H7g13004 | CX7g047735 | LOC_Os07g07010 | Os07g0164500 | - | Detail |
| C1H7g21914 | 7:2,972,390-2,973,941 | + | C2H7g29770 | CX7g048909 | LOC_Os07g07020 | Os07g0164600 | - | Detail |
| C1H7g10253 | 7:2,979,263-2,981,271 | + | C2H7g22158 | CX7g050369 | LOC_Os07g07040 | Os07g0164800 | - | Detail |
| C1H7g18807 | 7:2,982,037-2,989,129 | - | C2H7g29990 | CX7g048267 | LOC_Os07g07050 | Os07g0164900 | - | Detail |
| C1H7g00647 | 7:2,991,445-2,995,951 | + | C2H7g08797 | CX7g048340 | LOC_Os07g07060 | Os07g0165000 | - | Detail |
| C1H7g27659 | 7:2,996,482-2,999,586 | - | C2H7g24346 | CX7g049088 | LOC_Os07g07070 | Os07g0165100 | - | Detail |
| C1H7g00683 | 7:3,002,443-3,009,769 | - | C2H7g29244 | CX7g049607 | LOC_Os07g07080 | Os07g0165200 | - | Detail |
| C1H7g28591 | 7:3,018,602-3,020,127 | + | - | - | LOC_Os07g07094 | Os07g0165300 | - | Detail |
| C1H7g18135 | 7:3,021,815-3,023,696 | - | - | - | LOC_Os07g07150 | Os07g0165700 | - | Detail |
| C1H7g08593 | 7:3,045,478-3,046,564 | + | C2H7g28487 | CX7g046732 | LOC_Os07g07170 | Os07g0165900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002967 | 1:26,275,366-26,279,000 | + | C1H1g09706 | C2H1g12880 | LOC_Os01g51220 | Os01g0708600 | - | Detail |
| CX1g004777 | 1:26,280,367-26,282,488 | - | C1H1g20984 | C2H1g01487 | LOC_Os01g51230 | Os01g0708700 | - | Detail |
| CX1g006124 | 1:26,287,334-26,291,166 | + | C1H1g24856 | C2H1g11902 | LOC_Os01g51250 | Os01g0708900 | - | Detail |
| CX1g004079 | 1:26,297,362-26,298,893 | + | C1H1g05640 | C2H1g26791 | LOC_Os01g51260 | Os01g0709000 | Os2R_MYB13 | Detail |
| CX1g000983 | 1:26,301,348-26,301,641 | - | - | - | LOC_Os01g51270 | - | - | Detail |
| CX1g006026 | 1:26,304,861-26,307,831 | + | C1H1g15780 | C2H1g16264 | LOC_Os01g51280 | Os01g0709400 | - | Detail |
| CX1g007054 | 1:26,309,382-26,317,472 | - | C1H1g31428 | C2H1g08623 | LOC_Os01g51290 | Os01g0709500 | - | Detail |
| CX1g001712 | 1:26,327,656-26,333,003 | + | C1H1g30106 | C2H1g14661 | LOC_Os01g51300 | Os01g0710000 | OsFVE, OsRBAP1, BGSD-2 | Detail |
| CX1g005112 | 1:26,334,709-26,335,515 | + | C1H5g24700 | C2H5g16790 | LOC_Os01g51310 | Os01g0710100 | - | Detail |
| CX1g005113 | 1:26,339,802-26,341,313 | - | - | - | LOC_Os01g51320 | Os01g0710200 | PAO1, OsPAO1, OsAO4 | Detail |
| CX1g003098 | 1:26,348,367-26,349,420 | - | C1H1g02532 | C2H1g15591 | LOC_Os01g51330 | Os01g0710300 | - | Detail |
| CX1g002067 | 1:26,349,561-26,349,764 | + | - | - | - | Os01g0710250 | - | Detail |
| CX1g004556 | 1:26,356,324-26,358,874 | - | C1H1g13107 | C2H1g15782 | LOC_Os05g30310 | Os01g0852650 | - | Detail |
| CX1g000647 | 1:26,360,438-26,361,808 | - | C1H1g29431 | C2H1g11214 | LOC_Os01g51360 | Os01g0710700 | - | Detail |
| CX1g002177 | 1:26,363,316-26,368,704 | + | C1H1g22136 | C2H1g10466 | LOC_Os01g51380 | Os01g0711000 | - | Detail |
| CX1g004912 | 1:26,375,649-26,379,210 | + | C1H1g20698 | C2H1g20058 | LOC_Os01g51390 | Os01g0711100 | - | Detail |
| CX1g006000 | 1:26,382,701-26,384,756 | + | C1H1g14378 | C2H1g29914 | LOC_Os01g51400 | Os01g0711200 | - | Detail |
| CX1g004328 | 1:26,391,636-26,397,562 | + | C1H1g06125 | C2H1g17094 | LOC_Os01g51410 | Os01g0711400 | - | Detail |
| CX1g005290 | 1:26,398,862-26,401,896 | + | C1H1g22520 | C2H1g13046 | LOC_Os01g51420 | Os01g0711500 | OsCBL10 | Detail |
| CX1g005961 | 1:26,404,259-26,405,755 | + | C1H5g09340 | C2H5g03274 | LOC_Os01g51430 | Os01g0711600 | - | Detail |