| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g09670 | 6:25,880,842-25,883,508 | - | C2H6g03801 | CX6g043434 | LOC_Os06g48980 | Os06g0703000 | - | Detail |
| C1H6g18502 | 6:25,887,723-25,892,407 | - | C2H6g17371 | CX6g045780 | LOC_Os06g49010 | Os06g0703500 | - | Detail |
| C1H6g16279 | 6:25,896,374-25,897,321 | - | - | - | LOC_Os06g49020 | Os06g0703600 | - | Detail |
| C1H6g29648 | 6:25,898,415-25,901,197 | + | C2H6g15424 | CX6g045783 | LOC_Os06g49030 | Os06g0703800 | - | Detail |
| C1H6g07308 | 6:25,910,174-25,919,099 | + | C2H6g26654 | CX6g045465 | LOC_Os06g49040 | Os06g0703900 | - | Detail |
| C1H6g31643 | 6:25,920,872-25,924,324 | + | C2H6g01098 | CX6g043942 | LOC_Os06g49060 | Os06g0704100 | - | Detail |
| C1H6g21776 | 6:25,925,126-25,925,469 | - | C2H6g14094 | CX6g043513 | LOC_Os06g49070 | Os06g0704200 | - | Detail |
| C1H6g04818 | 6:25,926,051-25,929,679 | + | C2H6g09929 | CX6g042446 | LOC_Os06g49080 | Os06g0704300 | C3H46, OsC3H46, LIC, OsLIC | Detail |
| C1H6g07512 | 6:25,931,685-25,936,836 | + | C2H6g08437 | CX6g045885 | LOC_Os06g49090 | Os06g0704400 | - | Detail |
| C1H6g27120 | 6:25,942,129-25,943,754 | + | C2H6g13363 | CX6g044421 | LOC_Os06g49100 | Os06g0704500 | - | Detail |
| C1H6g00037 | 6:25,945,314-25,949,616 | - | C2H6g08289 | CX6g045141 | LOC_Os06g49110 | Os06g0704600 | - | Detail |
| C1H6g20822 | 6:25,950,325-25,954,757 | - | C2H6g04274 | CX6g043594 | LOC_Os06g49120 | Os06g0704700 | - | Detail |
| C1H6g30381 | 6:25,956,036-25,970,978 | - | C2H6g29592 | CX6g043593 | LOC_Os06g49130 | Os06g0704800 | OsHAC704, OsHAC12 | Detail |
| C1H6g14385 | 6:25,971,877-25,974,591 | + | C2H6g27374 | CX6g041788 | LOC_Os06g49140 | Os06g0704900 | - | Detail |
| C1H6g27051 | 6:25,976,378-25,978,262 | + | C2H6g16318 | CX6g041568 | LOC_Os06g49150 | Os06g0705000 | OsGMT1 | Detail |
| C1H6g17550 | 6:25,979,273-25,980,346 | + | C2H6g07212 | CX6g041902 | LOC_Os06g49160 | Os06g0705100 | - | Detail |
| C1H6g05795 | 6:25,981,184-25,984,997 | - | C2H6g22144 | CX6g044278 | LOC_Os06g49170 | Os06g0705200 | - | Detail |
| C1H6g31669 | 6:25,987,417-25,993,127 | - | C2H6g27734 | CX6g041917 | LOC_Os06g49185 | Os06g0705300 | - | Detail |
| C1H6g13928 | 6:25,993,988-25,996,225 | - | C2H6g16745 | CX6g041917 | LOC_Os06g46840 | Os06g0705350 | - | Detail |
| C1H6g11993 | 6:25,997,556-25,997,852 | + | - | CX6g044181 | LOC_Os06g49190 | Os06g0705400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002967 | 1:26,275,366-26,279,000 | + | C1H1g09706 | C2H1g12880 | LOC_Os01g51220 | Os01g0708600 | - | Detail |
| CX1g004777 | 1:26,280,367-26,282,488 | - | C1H1g20984 | C2H1g01487 | LOC_Os01g51230 | Os01g0708700 | - | Detail |
| CX1g006124 | 1:26,287,334-26,291,166 | + | C1H1g24856 | C2H1g11902 | LOC_Os01g51250 | Os01g0708900 | - | Detail |
| CX1g004079 | 1:26,297,362-26,298,893 | + | C1H1g05640 | C2H1g26791 | LOC_Os01g51260 | Os01g0709000 | Os2R_MYB13 | Detail |
| CX1g000983 | 1:26,301,348-26,301,641 | - | - | - | LOC_Os01g51270 | - | - | Detail |
| CX1g006026 | 1:26,304,861-26,307,831 | + | C1H1g15780 | C2H1g16264 | LOC_Os01g51280 | Os01g0709400 | - | Detail |
| CX1g007054 | 1:26,309,382-26,317,472 | - | C1H1g31428 | C2H1g08623 | LOC_Os01g51290 | Os01g0709500 | - | Detail |
| CX1g001712 | 1:26,327,656-26,333,003 | + | C1H1g30106 | C2H1g14661 | LOC_Os01g51300 | Os01g0710000 | OsFVE, OsRBAP1, BGSD-2 | Detail |
| CX1g005112 | 1:26,334,709-26,335,515 | + | C1H5g24700 | C2H5g16790 | LOC_Os01g51310 | Os01g0710100 | - | Detail |
| CX1g005113 | 1:26,339,802-26,341,313 | - | - | - | LOC_Os01g51320 | Os01g0710200 | PAO1, OsPAO1, OsAO4 | Detail |
| CX1g003098 | 1:26,348,367-26,349,420 | - | C1H1g02532 | C2H1g15591 | LOC_Os01g51330 | Os01g0710300 | - | Detail |
| CX1g002067 | 1:26,349,561-26,349,764 | + | - | - | - | Os01g0710250 | - | Detail |
| CX1g004556 | 1:26,356,324-26,358,874 | - | C1H1g13107 | C2H1g15782 | LOC_Os05g30310 | Os01g0852650 | - | Detail |
| CX1g000647 | 1:26,360,438-26,361,808 | - | C1H1g29431 | C2H1g11214 | LOC_Os01g51360 | Os01g0710700 | - | Detail |
| CX1g002177 | 1:26,363,316-26,368,704 | + | C1H1g22136 | C2H1g10466 | LOC_Os01g51380 | Os01g0711000 | - | Detail |
| CX1g004912 | 1:26,375,649-26,379,210 | + | C1H1g20698 | C2H1g20058 | LOC_Os01g51390 | Os01g0711100 | - | Detail |
| CX1g006000 | 1:26,382,701-26,384,756 | + | C1H1g14378 | C2H1g29914 | LOC_Os01g51400 | Os01g0711200 | - | Detail |
| CX1g004328 | 1:26,391,636-26,397,562 | + | C1H1g06125 | C2H1g17094 | LOC_Os01g51410 | Os01g0711400 | - | Detail |
| CX1g005290 | 1:26,398,862-26,401,896 | + | C1H1g22520 | C2H1g13046 | LOC_Os01g51420 | Os01g0711500 | OsCBL10 | Detail |
| CX1g005961 | 1:26,404,259-26,405,755 | + | C1H5g09340 | C2H5g03274 | LOC_Os01g51430 | Os01g0711600 | - | Detail |