| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g05447 | 1:3,897,349-3,900,750 | + | C2H1g11034 | CX1g004726 | LOC_Os01g08850 | Os01g0184000 | - | Detail |
| C1H1g08258 | 1:3,903,267-3,907,393 | - | C2H1g25930 | CX1g006276 | LOC_Os01g08930 | Os01g0184500 | - | Detail |
| C1H1g29228 | 1:3,913,630-3,914,392 | + | C2H1g18729 | CX1g005580 | LOC_Os01g08950 | Os01g0715800 | - | Detail |
| C1H1g07230 | 1:3,914,526-3,917,510 | - | C2H1g08065 | CX1g001833 | LOC_Os01g08960 | Os01g0184800 | - | Detail |
| C1H1g00754 | 1:3,917,719-3,924,507 | + | C2H1g16483 | CX1g001927 | LOC_Os01g08970 | Os01g0184900 | - | Detail |
| C1H1g18602 | 1:3,925,864-3,929,743 | + | C2H1g08712 | CX1g006005 | LOC_Os01g08990 | Os01g0185100 | - | Detail |
| C1H1g09937 | 1:3,931,008-3,937,066 | - | C2H1g10102 | CX1g000003 | LOC_Os01g09000 | Os01g0185200 | - | Detail |
| C1H1g12656 | 1:3,944,739-3,949,168 | + | C2H1g17955 | CX1g005455 | LOC_Os01g09010 | Os01g0185300 | - | Detail |
| C1H1g03940 | 1:3,950,356-3,956,527 | + | C2H1g17802 | CX1g004120 | LOC_Os01g09020 | Os01g0185400 | OsCBE1 | Detail |
| C1H1g23338 | 1:3,959,401-3,962,917 | + | C2H1g12463 | CX1g004591 | LOC_Os01g09030 | Os01g0185500 | - | Detail |
| C1H1g06268 | 1:3,972,573-3,974,529 | + | C2H1g25484 | CX1g000928 | LOC_Os01g09080 | Os01g0185900 | - | Detail |
| C1H1g00047 | 1:3,988,556-3,991,526 | - | C2H1g05521 | CX1g004425 | LOC_Os01g09120 | Os01g0186200 | - | Detail |
| C1H1g06584 | 1:4,001,275-4,002,665 | - | C2H1g14524 | - | - | - | - | Detail |
| C1H1g20061 | 1:4,004,571-4,011,310 | - | - | - | - | - | - | Detail |
| C1H1g09605 | 1:4,035,938-4,045,487 | - | C2H1g24918 | CX1g001893 | LOC_Os01g09200 | Os01g0186700 | OsSTK38, TINY1 | Detail |
| C1H1g07377 | 1:4,060,793-4,062,834 | + | C2H1g05283 | CX1g002460 | LOC_Os01g09230 | Os01g0187000 | - | Detail |
| C1H1g28342 | 1:4,080,979-4,092,678 | + | C2H1g23178 | CX1g002282 | LOC_Os01g09246 | Os01g0187400 | - | Detail |
| C1H1g13448 | 1:4,094,957-4,098,718 | + | C2H1g13013 | CX1g002953 | LOC_Os01g09252 | Os01g0187500 | - | Detail |
| C1H1g18332 | 1:4,102,891-4,103,172 | - | C2H1g05231 | CX1g004008 | LOC_Os01g09260 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| C1H1g10697 | 1:4,103,286-4,105,381 | - | C2H1g05231 | CX1g004008 | LOC_Os01g09260 | Os01g0187600 | OsCKX1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049302 | 7:1,977,697-1,979,145 | - | C1H7g16311 | C2H7g14480 | LOC_Os07g04970 | Os07g0142700 | - | Detail |
| CX7g048918 | 7:1,981,675-1,984,338 | + | C1H7g23730 | C2H7g13386 | LOC_Os07g04980 | Os07g0118800 | - | Detail |
| CX7g046865 | 7:1,985,065-1,987,958 | + | C1H7g23399 | C2H7g27275 | LOC_Os07g04990 | Os07g0142900 | - | Detail |
| CX7g048357 | 7:1,990,991-1,994,352 | + | C1H7g28462 | C2H7g27275 | LOC_Os07g05000 | Os07g0143000 | - | Detail |
| CX7g048872 | 7:2,000,215-2,001,957 | + | C1H7g12552 | C2H7g14513 | LOC_Os07g05010 | Os07g0143200 | OsPIF14, OsPIF14β, OsPIF14b, PIL14 | Detail |
| CX7g046854 | 7:2,011,207-2,013,737 | - | C1H7g09908 | C2H7g20668 | - | - | - | Detail |
| CX7g048569 | 7:2,015,734-2,017,401 | - | C1H7g25943 | C2H7g24721 | LOC_Os07g05040 | Os07g0143600 | - | Detail |
| CX7g048216 | 7:2,018,473-2,023,621 | - | C1H7g01640 | C2H7g00608 | LOC_Os07g05050 | Os07g0143700 | OsRH53 | Detail |
| CX7g050400 | 7:2,028,353-2,028,645 | + | C1H7g27141 | C2H4g24787 | - | - | - | Detail |
| CX7g049966 | 7:2,033,262-2,034,910 | + | C1H7g10624 | C2H7g04210 | LOC_Os07g05110 | Os07g0144500 | - | Detail |
| CX7g049847 | 7:2,035,474-2,037,350 | - | C1H7g23348 | C2H7g16275 | LOC_Os07g05120 | - | - | Detail |
| CX7g046422 | 7:2,051,264-2,051,761 | - | C1H7g10880 | C2H7g23169 | LOC_Os07g05150 | Os07g0144900 | - | Detail |
| CX7g046504 | 7:2,052,302-2,052,826 | + | C1H7g09042 | C2H7g08843 | LOC_Os07g05160 | Os07g0144900 | - | Detail |
| CX7g048631 | 7:2,059,389-2,059,895 | + | C1H7g09042 | C2H7g23169 | LOC_Os07g05180 | Os07g0144900 | - | Detail |
| CX7g049168 | 7:2,060,405-2,060,662 | + | - | - | - | - | - | Detail |
| CX7g049183 | 7:2,062,489-2,066,805 | - | C1H7g17569 | C2H7g13737 | LOC_Os07g05190 | Os07g0145400 | - | Detail |
| CX7g049547 | 7:2,082,197-2,082,910 | - | C1H7g14394 | C2H7g08515 | LOC_Os07g05260 | Os07g0146300 | - | Detail |
| CX7g048306 | 7:2,103,152-2,103,649 | - | - | - | - | - | - | Detail |
| CX7g048696 | 7:2,135,077-2,136,168 | + | C1H7g21360 | C2H7g29915 | LOC_Os07g05360 | Os07g0147500 | - | Detail |
| CX7g050355 | 7:2,137,672-2,138,621 | + | C1H7g08457 | C2H7g26151 | LOC_Os07g05365 | Os07g0147550 | - | Detail |