| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g23265 | 3:1,235,832-1,236,371 | + | C1H3g10403 | CX3g027007 | LOC_Os03g03440 | Os03g0125900 | - | Detail |
| C2H3g03318 | 3:1,237,434-1,242,083 | - | C1H3g12126 | CX3g030160 | LOC_Os03g03450 | Os03g0126000 | - | Detail |
| C2H3g01117 | 3:1,245,855-1,250,733 | - | C1H3g18852 | CX3g027762 | LOC_Os03g03460 | Os03g0126100 | - | Detail |
| C2H3g09637 | 3:1,252,295-1,259,222 | - | C1H3g19764 | CX3g026825 | LOC_Os03g03470 | Os03g0126300 | - | Detail |
| C2H3g01245 | 3:1,260,350-1,261,060 | - | C1H3g31582 | CX3g030498 | LOC_Os03g03480 | Os03g0126450 | - | Detail |
| C2H3g24889 | 3:1,263,662-1,264,351 | + | C1H3g28463 | CX3g031250 | LOC_Os03g03490 | Os03g0126600 | - | Detail |
| C2H3g03559 | 3:1,266,510-1,267,383 | + | C1H3g02888 | CX3g030815 | LOC_Os03g03500 | Os03g0126700 | - | Detail |
| C2H3g24408 | 3:1,270,166-1,273,929 | - | C1H3g13225 | CX3g025902 | LOC_Os03g03510 | Os03g0126800 | CIPK9 | Detail |
| C2H3g27173 | 3:1,277,534-1,277,890 | - | C1H3g17944 | CX3g025296 | LOC_Os03g03520 | Os03g0126900 | - | Detail |
| C2H3g18981 | 3:1,280,309-1,281,951 | - | C1H3g26030 | CX3g025913 | LOC_Os03g03530 | Os03g0127000 | - | Detail |
| C2H3g03780 | 3:1,282,147-1,282,497 | + | C1H3g10455 | - | - | - | - | Detail |
| C2H3g10836 | 3:1,288,174-1,290,490 | - | C1H3g07061 | CX3g025702 | LOC_Os03g03540 | Os03g0624600 | - | Detail |
| C2H3g05840 | 3:1,311,541-1,313,944 | + | C1H3g08724 | CX3g026687 | LOC_Os03g03550 | Os03g0127500 | - | Detail |
| C2H3g22731 | 3:1,314,269-1,319,253 | - | C1H3g30951 | CX3g027794 | LOC_Os03g03560 | Os03g0127600 | - | Detail |
| C2H3g10932 | 3:1,322,038-1,325,387 | + | C1H3g04194 | CX3g029550 | LOC_Os03g03570 | Os03g0127700 | - | Detail |
| C2H3g19343 | 3:1,328,504-1,336,058 | - | C1H3g21101 | CX3g028222 | LOC_Os03g03590 | Os03g0127900 | - | Detail |
| C2H3g04515 | 3:1,339,764-1,340,969 | + | C1H3g15997 | CX3g029732 | LOC_Os03g03600 | Os03g0128000 | - | Detail |
| C2H3g21656 | 3:1,342,440-1,363,000 | - | C1H3g11304 | CX3g027243 | LOC_Os03g03610 | Os03g0128100 | - | Detail |
| C2H3g11243 | 3:1,368,193-1,368,760 | - | C1H3g22245 | CX3g025297 | LOC_Os03g03630 | Os03g0128300 | - | Detail |
| C2H3g19615 | 3:1,370,201-1,371,413 | - | C1H3g27628 | CX3g029085 | LOC_Os03g03640 | Os03g0128400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049140 | 7:1,851,272-1,852,933 | - | C1H7g19541 | C2H7g26055 | LOC_Os07g04650 | Os07g0139000 | - | Detail |
| CX7g046643 | 7:1,854,461-1,855,288 | - | C1H7g20593 | C2H7g26853 | - | - | - | Detail |
| CX7g050249 | 7:1,854,491-1,855,297 | + | - | - | - | - | - | Detail |
| CX7g048585 | 7:1,856,455-1,857,285 | - | - | C2H7g03846 | LOC_Os07g04670 | Os07g0139300 | G1, g1 (lng), lng, g1, ELE | Detail |
| CX7g048151 | 7:1,869,721-1,872,193 | + | C1H7g02240 | C2H7g30228 | LOC_Os07g04690 | Os07g0139400 | - | Detail |
| CX7g048919 | 7:1,874,532-1,881,188 | - | C1H7g29385 | C2H7g01643 | LOC_Os07g04700 | Os07g0139500 | - | Detail |
| CX7g048146 | 7:1,882,157-1,882,360 | - | - | - | - | - | - | Detail |
| CX7g049463 | 7:1,905,316-1,906,758 | - | C1H7g26824 | C2H7g19248 | LOC_Os07g04810 | Os07g0141100 | MAK9 | Detail |
| CX7g047585 | 7:1,910,866-1,912,349 | + | C1H7g15614 | C2H7g14424 | LOC_Os07g04820 | Os07g0141200 | OsSPL26 | Detail |
| CX7g049744 | 7:1,916,476-1,917,921 | - | C1H7g15614 | C2H7g14424 | LOC_Os07g04820 | Os07g0141200 | OsSPL26 | Detail |
| CX7g046266 | 7:1,918,692-1,918,962 | + | - | - | - | - | - | Detail |
| CX7g049078 | 7:1,921,131-1,922,245 | - | C1H7g19398 | C2H7g12770 | LOC_Os07g04840 | Os07g0141400 | - | Detail |
| CX7g049707 | 7:1,923,966-1,927,308 | - | C1H7g31696 | C2H7g00153 | LOC_Os07g04860 | Os07g0141450 | - | Detail |
| CX7g046101 | 7:1,927,988-1,933,469 | + | C1H7g09323 | C2H7g16296 | LOC_Os07g04850 | Os07g0141600 | - | Detail |
| CX7g046767 | 7:1,934,303-1,938,212 | - | C1H7g23727 | C2H7g21156 | LOC_Os07g09940 | Os07g0141700 | - | Detail |
| CX7g046239 | 7:1,955,492-1,956,609 | + | C1H7g18918 | C2H7g11404 | LOC_Os07g04910 | Os07g0142000 | - | Detail |
| CX7g046276 | 7:1,961,199-1,961,696 | + | C1H7g24090 | C2H7g05991 | LOC_Os07g04930 | Os07g0142200 | - | Detail |
| CX7g048051 | 7:1,963,636-1,964,208 | + | C1H7g05719 | C2H7g04010 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| CX7g048543 | 7:1,966,166-1,966,672 | + | C1H7g05719 | C2H7g04010 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| CX7g048364 | 7:1,973,916-1,974,350 | + | C1H7g05719 | C2H7g10792 | LOC_Os07g04960 | Os07g0142600 | - | Detail |