| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g26824 | 5:22,539,796-22,540,670 | + | C1H5g29960 | CX5g040694 | LOC_Os05g43240 | Os05g0541800 | - | Detail |
| C2H5g22825 | 5:22,541,243-22,542,775 | - | C1H5g10948 | CX5g039692 | LOC_Os05g46430 | Os05g0541900 | - | Detail |
| C2H5g27157 | 5:22,546,775-22,547,041 | - | C1H5g24953 | CX5g039049 | LOC_Os05g46440 | Os05g0542001 | - | Detail |
| C2H5g28898 | 5:22,547,597-22,550,385 | - | C1H5g29646 | CX5g040991 | LOC_Os05g46450 | Os05g0542100 | - | Detail |
| C2H5g10686 | 5:22,552,795-22,556,824 | - | C1H5g28336 | CX5g040398 | LOC_Os05g46460 | Os05g0542200 | - | Detail |
| C2H5g01306 | 5:22,562,391-22,563,212 | - | C1H5g22742 | - | LOC_Os05g46470 | Os05g0542300 | - | Detail |
| C2H5g20940 | 5:22,566,991-22,567,960 | + | C1H5g09305 | CX5g039111 | LOC_Os05g46480 | Os05g0542500 | OsLEA3-1 | Detail |
| C2H5g28006 | 5:22,570,469-22,575,907 | + | C1H5g16366 | CX5g038812 | LOC_Os05g46490 | Os05g0542600 | - | Detail |
| C2H5g00090 | 5:22,576,971-22,577,303 | + | C1H5g17509 | CX5g036843 | LOC_Os05g46500 | Os05g0542732 | - | Detail |
| C2H5g29209 | 5:22,579,557-22,582,434 | + | C1H5g04581 | CX5g038839 | LOC_Os05g46510 | Os05g0542800 | - | Detail |
| C2H5g29484 | 5:22,582,645-22,585,166 | + | C1H5g22788 | CX5g037613 | LOC_Os05g46520 | Os05g0542900 | - | Detail |
| C2H5g09269 | 5:22,587,092-22,588,125 | + | C1H5g21931 | CX5g040487 | LOC_Os05g46530 | Os05g0543000 | OSIPP3 | Detail |
| C2H5g29215 | 5:22,591,248-22,594,627 | - | C1H5g12205 | CX5g038871 | LOC_Os05g46550 | Os05g0543100 | - | Detail |
| C2H5g26031 | 5:22,595,364-22,598,453 | + | C1H5g11939 | CX5g038262 | LOC_Os05g46560 | Os05g0543200 | - | Detail |
| C2H5g16707 | 5:22,599,960-22,602,662 | + | C1H5g08116 | CX5g036803 | LOC_Os05g46570 | Os05g0543300 | - | Detail |
| C2H5g01982 | 5:22,603,608-22,606,845 | - | C1H5g14558 | CX5g038659 | LOC_Os05g46580 | Os05g0543400 | - | Detail |
| C2H5g14629 | 5:22,610,907-22,611,393 | + | C1H5g03603 | CX5g038075 | LOC_Os03g57910 | Os05g0123100 | OsGT43A | Detail |
| C2H5g18850 | 5:22,627,450-22,628,602 | + | C1H5g29668 | CX5g040628 | LOC_Os05g46610 | Os05g0543600 | RLM1 | Detail |
| C2H5g12435 | 5:22,631,435-22,634,863 | - | C1H5g30521 | CX5g039679 | LOC_Os05g46620 | Os05g0543700 | - | Detail |
| C2H5g01174 | 5:22,635,754-22,638,826 | - | C1H5g07279 | CX5g038009 | LOC_Os05g46630 | Os05g0543800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049140 | 7:1,851,272-1,852,933 | - | C1H7g19541 | C2H7g26055 | LOC_Os07g04650 | Os07g0139000 | - | Detail |
| CX7g046643 | 7:1,854,461-1,855,288 | - | C1H7g20593 | C2H7g26853 | - | - | - | Detail |
| CX7g050249 | 7:1,854,491-1,855,297 | + | - | - | - | - | - | Detail |
| CX7g048585 | 7:1,856,455-1,857,285 | - | - | C2H7g03846 | LOC_Os07g04670 | Os07g0139300 | G1, g1 (lng), lng, g1, ELE | Detail |
| CX7g048151 | 7:1,869,721-1,872,193 | + | C1H7g02240 | C2H7g30228 | LOC_Os07g04690 | Os07g0139400 | - | Detail |
| CX7g048919 | 7:1,874,532-1,881,188 | - | C1H7g29385 | C2H7g01643 | LOC_Os07g04700 | Os07g0139500 | - | Detail |
| CX7g048146 | 7:1,882,157-1,882,360 | - | - | - | - | - | - | Detail |
| CX7g049463 | 7:1,905,316-1,906,758 | - | C1H7g26824 | C2H7g19248 | LOC_Os07g04810 | Os07g0141100 | MAK9 | Detail |
| CX7g047585 | 7:1,910,866-1,912,349 | + | C1H7g15614 | C2H7g14424 | LOC_Os07g04820 | Os07g0141200 | OsSPL26 | Detail |
| CX7g049744 | 7:1,916,476-1,917,921 | - | C1H7g15614 | C2H7g14424 | LOC_Os07g04820 | Os07g0141200 | OsSPL26 | Detail |
| CX7g046266 | 7:1,918,692-1,918,962 | + | - | - | - | - | - | Detail |
| CX7g049078 | 7:1,921,131-1,922,245 | - | C1H7g19398 | C2H7g12770 | LOC_Os07g04840 | Os07g0141400 | - | Detail |
| CX7g049707 | 7:1,923,966-1,927,308 | - | C1H7g31696 | C2H7g00153 | LOC_Os07g04860 | Os07g0141450 | - | Detail |
| CX7g046101 | 7:1,927,988-1,933,469 | + | C1H7g09323 | C2H7g16296 | LOC_Os07g04850 | Os07g0141600 | - | Detail |
| CX7g046767 | 7:1,934,303-1,938,212 | - | C1H7g23727 | C2H7g21156 | LOC_Os07g09940 | Os07g0141700 | - | Detail |
| CX7g046239 | 7:1,955,492-1,956,609 | + | C1H7g18918 | C2H7g11404 | LOC_Os07g04910 | Os07g0142000 | - | Detail |
| CX7g046276 | 7:1,961,199-1,961,696 | + | C1H7g24090 | C2H7g05991 | LOC_Os07g04930 | Os07g0142200 | - | Detail |
| CX7g048051 | 7:1,963,636-1,964,208 | + | C1H7g05719 | C2H7g04010 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| CX7g048543 | 7:1,966,166-1,966,672 | + | C1H7g05719 | C2H7g04010 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| CX7g048364 | 7:1,973,916-1,974,350 | + | C1H7g05719 | C2H7g10792 | LOC_Os07g04960 | Os07g0142600 | - | Detail |