| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g22396 | 3:7,108,898-7,109,449 | - | C2H3g07197 | CX3g030425 | - | - | - | Detail |
| C1H3g11496 | 3:7,113,752-7,114,810 | - | C2H3g07863 | CX3g028408 | LOC_Os03g14730 | Os03g0252100 | DIP12, OsDIP12 | Detail |
| C1H3g20834 | 3:7,144,714-7,145,296 | + | C2H3g09632 | CX3g025353 | LOC_Os03g14790 | - | - | Detail |
| C1H3g27328 | 3:7,145,872-7,149,486 | + | C2H3g26671 | CX3g025353 | LOC_Os03g14790 | Os03g0682200 | - | Detail |
| C1H3g10342 | 3:7,151,431-7,156,722 | - | C2H3g27873 | CX3g029321 | LOC_Os03g14800 | Os03g0252800 | - | Detail |
| C1H3g03427 | 3:7,161,182-7,161,757 | - | C2H3g05415 | CX3g026810 | LOC_Os03g14810 | Os03g0252900 | - | Detail |
| C1H3g13989 | 3:7,167,783-7,173,515 | - | C2H3g20389 | CX3g025241 | - | Os03g0253100 | - | Detail |
| C1H3g21796 | 3:7,182,060-7,183,592 | + | C2H3g29944 | CX3g029104 | LOC_Os03g14840 | Os03g0253200 | - | Detail |
| C1H3g30447 | 3:7,197,443-7,198,741 | - | C2H3g07742 | CX3g029003 | LOC_Os03g14860 | Os03g0253500 | - | Detail |
| C1H3g10348 | 3:7,202,134-7,203,147 | - | C2H3g06446 | CX3g028867 | LOC_Os03g14880 | Os03g0253600 | - | Detail |
| C1H3g02049 | 3:7,218,395-7,223,525 | - | C2H3g06821 | - | LOC_Os03g14890 | Os03g0253800 | - | Detail |
| C1H3g17610 | 3:7,225,568-7,229,374 | - | C2H3g12053 | CX3g029243 | LOC_Os03g14900 | Os03g0254000 | - | Detail |
| C1H3g15353 | 3:7,232,363-7,234,224 | + | C2H3g19284 | CX3g028413 | LOC_Os03g14910 | Os03g0254200 | - | Detail |
| C1H3g13729 | 3:7,235,215-7,235,989 | + | C2H3g17074 | CX3g025235 | LOC_Os03g14915 | - | - | Detail |
| C1H3g15012 | 3:7,246,382-7,248,584 | + | C2H3g07624 | CX3g027887 | LOC_Os03g14950 | Os03g0254400 | - | Detail |
| C1H3g14658 | 3:7,253,101-7,253,379 | - | C2H3g23799 | CX3g029818 | - | - | - | Detail |
| C1H3g26948 | 3:7,257,504-7,267,353 | - | C2H3g04070 | - | - | - | - | Detail |
| C1H3g12429 | 3:7,269,834-7,273,697 | - | C2H3g05698 | CX3g030250 | LOC_Os03g14990 | Os03g0254800 | - | Detail |
| C1H3g29260 | 3:7,274,188-7,278,418 | - | C2H3g27981 | CX3g028925 | LOC_Os03g15000 | Os03g0254900 | - | Detail |
| C1H3g29943 | 3:7,284,805-7,287,831 | + | C2H3g19768 | CX3g027619 | LOC_Os03g15010 | Os03g0255000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049140 | 7:1,851,272-1,852,933 | - | C1H7g19541 | C2H7g26055 | LOC_Os07g04650 | Os07g0139000 | - | Detail |
| CX7g046643 | 7:1,854,461-1,855,288 | - | C1H7g20593 | C2H7g26853 | - | - | - | Detail |
| CX7g050249 | 7:1,854,491-1,855,297 | + | - | - | - | - | - | Detail |
| CX7g048585 | 7:1,856,455-1,857,285 | - | - | C2H7g03846 | LOC_Os07g04670 | Os07g0139300 | G1, g1 (lng), lng, g1, ELE | Detail |
| CX7g048151 | 7:1,869,721-1,872,193 | + | C1H7g02240 | C2H7g30228 | LOC_Os07g04690 | Os07g0139400 | - | Detail |
| CX7g048919 | 7:1,874,532-1,881,188 | - | C1H7g29385 | C2H7g01643 | LOC_Os07g04700 | Os07g0139500 | - | Detail |
| CX7g048146 | 7:1,882,157-1,882,360 | - | - | - | - | - | - | Detail |
| CX7g049463 | 7:1,905,316-1,906,758 | - | C1H7g26824 | C2H7g19248 | LOC_Os07g04810 | Os07g0141100 | MAK9 | Detail |
| CX7g047585 | 7:1,910,866-1,912,349 | + | C1H7g15614 | C2H7g14424 | LOC_Os07g04820 | Os07g0141200 | OsSPL26 | Detail |
| CX7g049744 | 7:1,916,476-1,917,921 | - | C1H7g15614 | C2H7g14424 | LOC_Os07g04820 | Os07g0141200 | OsSPL26 | Detail |
| CX7g046266 | 7:1,918,692-1,918,962 | + | - | - | - | - | - | Detail |
| CX7g049078 | 7:1,921,131-1,922,245 | - | C1H7g19398 | C2H7g12770 | LOC_Os07g04840 | Os07g0141400 | - | Detail |
| CX7g049707 | 7:1,923,966-1,927,308 | - | C1H7g31696 | C2H7g00153 | LOC_Os07g04860 | Os07g0141450 | - | Detail |
| CX7g046101 | 7:1,927,988-1,933,469 | + | C1H7g09323 | C2H7g16296 | LOC_Os07g04850 | Os07g0141600 | - | Detail |
| CX7g046767 | 7:1,934,303-1,938,212 | - | C1H7g23727 | C2H7g21156 | LOC_Os07g09940 | Os07g0141700 | - | Detail |
| CX7g046239 | 7:1,955,492-1,956,609 | + | C1H7g18918 | C2H7g11404 | LOC_Os07g04910 | Os07g0142000 | - | Detail |
| CX7g046276 | 7:1,961,199-1,961,696 | + | C1H7g24090 | C2H7g05991 | LOC_Os07g04930 | Os07g0142200 | - | Detail |
| CX7g048051 | 7:1,963,636-1,964,208 | + | C1H7g05719 | C2H7g04010 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| CX7g048543 | 7:1,966,166-1,966,672 | + | C1H7g05719 | C2H7g04010 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| CX7g048364 | 7:1,973,916-1,974,350 | + | C1H7g05719 | C2H7g10792 | LOC_Os07g04960 | Os07g0142600 | - | Detail |