| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08742 | 1:37,878,810-37,879,475 | + | C2H1g00754 | CX1g003828 | LOC_Os01g73770 | Os01g0968800 | OsDREB1F | Detail |
| C1H1g28424 | 1:37,889,332-37,890,883 | - | C2H1g09238 | CX1g003644 | LOC_Os01g73780 | Os01g0969000 | - | Detail |
| C1H1g31794 | 1:37,891,446-37,894,977 | - | C2H1g20740 | CX1g006205 | LOC_Os01g73790 | Os01g0969100 | - | Detail |
| C1H1g01507 | 1:37,906,288-37,909,549 | + | C2H1g09544 | CX1g003584 | LOC_Os01g73880 | Os01g0970400 | - | Detail |
| C1H1g08350 | 1:37,911,627-37,912,946 | + | C2H1g13571 | CX1g002862 | LOC_Os01g73890 | Os01g0970500 | OsTFIIAgamma1, OsTFIIAγ1 | Detail |
| C1H1g18423 | 1:37,913,620-37,917,041 | - | C2H1g20677 | CX1g006271 | LOC_Os01g73900 | Os01g0970600 | OsRH58 | Detail |
| C1H1g08408 | 1:37,918,204-37,920,437 | - | C2H1g02029 | CX1g001477 | LOC_Os01g73910 | Os01g0970700 | - | Detail |
| C1H1g27707 | 1:37,921,319-37,926,355 | - | C2H1g20906 | CX1g000299 | LOC_Os01g73950 | Os01g0970900 | - | Detail |
| C1H1g29874 | 1:37,922,784-37,923,023 | + | - | CX1g001068 | LOC_Os01g73940 | Os01g0971000 | - | Detail |
| C1H1g24776 | 1:37,929,699-37,931,836 | + | C2H1g18524 | CX1g003601 | LOC_Os01g73960 | Os01g0971100 | OsDi19-5 | Detail |
| C1H1g21855 | 1:37,933,279-37,937,712 | - | C2H1g12108 | CX1g003985 | LOC_Os01g73970 | Os01g0971200 | - | Detail |
| C1H1g24112 | 1:37,940,102-37,941,882 | + | C2H1g29254 | CX1g001229 | LOC_Os01g73980 | Os01g0971400 | - | Detail |
| C1H1g16044 | 1:37,943,109-37,944,391 | + | C2H1g07849 | CX1g006897 | LOC_Os01g73990 | Os01g0971500 | - | Detail |
| C1H1g29294 | 1:37,947,500-37,948,726 | - | C2H1g06455 | CX1g006969 | LOC_Os01g74000 | Os01g0971600 | - | Detail |
| C1H1g07344 | 1:37,948,790-37,950,687 | - | C2H1g06455 | CX1g006969 | LOC_Os01g74000 | Os01g0971600 | - | Detail |
| C1H1g11998 | 1:37,951,933-37,957,466 | - | C2H1g14357 | CX1g003751 | LOC_Os01g74010 | Os01g0971700 | - | Detail |
| C1H1g09458 | 1:37,958,268-37,958,999 | - | C2H1g05837 | CX1g002155 | LOC_Os01g74020 | Os01g0971800 | OsPCL1, OsLUX | Detail |
| C1H1g15323 | 1:37,960,317-37,966,793 | - | C2H1g13899 | CX1g001256 | LOC_Os01g74030 | Os01g0971900 | - | Detail |
| C1H1g17657 | 1:37,967,965-37,971,177 | + | C2H1g06104 | CX1g000341 | LOC_Os01g74040 | Os01g0972000 | - | Detail |
| C1H1g23136 | 1:37,972,684-37,974,615 | - | C2H1g26306 | CX1g006301 | LOC_Os01g74110 | Os01g0972200 | OsZIP1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049140 | 7:1,851,272-1,852,933 | - | C1H7g19541 | C2H7g26055 | LOC_Os07g04650 | Os07g0139000 | - | Detail |
| CX7g046643 | 7:1,854,461-1,855,288 | - | C1H7g20593 | C2H7g26853 | - | - | - | Detail |
| CX7g050249 | 7:1,854,491-1,855,297 | + | - | - | - | - | - | Detail |
| CX7g048585 | 7:1,856,455-1,857,285 | - | - | C2H7g03846 | LOC_Os07g04670 | Os07g0139300 | G1, g1 (lng), lng, g1, ELE | Detail |
| CX7g048151 | 7:1,869,721-1,872,193 | + | C1H7g02240 | C2H7g30228 | LOC_Os07g04690 | Os07g0139400 | - | Detail |
| CX7g048919 | 7:1,874,532-1,881,188 | - | C1H7g29385 | C2H7g01643 | LOC_Os07g04700 | Os07g0139500 | - | Detail |
| CX7g048146 | 7:1,882,157-1,882,360 | - | - | - | - | - | - | Detail |
| CX7g049463 | 7:1,905,316-1,906,758 | - | C1H7g26824 | C2H7g19248 | LOC_Os07g04810 | Os07g0141100 | MAK9 | Detail |
| CX7g047585 | 7:1,910,866-1,912,349 | + | C1H7g15614 | C2H7g14424 | LOC_Os07g04820 | Os07g0141200 | OsSPL26 | Detail |
| CX7g049744 | 7:1,916,476-1,917,921 | - | C1H7g15614 | C2H7g14424 | LOC_Os07g04820 | Os07g0141200 | OsSPL26 | Detail |
| CX7g046266 | 7:1,918,692-1,918,962 | + | - | - | - | - | - | Detail |
| CX7g049078 | 7:1,921,131-1,922,245 | - | C1H7g19398 | C2H7g12770 | LOC_Os07g04840 | Os07g0141400 | - | Detail |
| CX7g049707 | 7:1,923,966-1,927,308 | - | C1H7g31696 | C2H7g00153 | LOC_Os07g04860 | Os07g0141450 | - | Detail |
| CX7g046101 | 7:1,927,988-1,933,469 | + | C1H7g09323 | C2H7g16296 | LOC_Os07g04850 | Os07g0141600 | - | Detail |
| CX7g046767 | 7:1,934,303-1,938,212 | - | C1H7g23727 | C2H7g21156 | LOC_Os07g09940 | Os07g0141700 | - | Detail |
| CX7g046239 | 7:1,955,492-1,956,609 | + | C1H7g18918 | C2H7g11404 | LOC_Os07g04910 | Os07g0142000 | - | Detail |
| CX7g046276 | 7:1,961,199-1,961,696 | + | C1H7g24090 | C2H7g05991 | LOC_Os07g04930 | Os07g0142200 | - | Detail |
| CX7g048051 | 7:1,963,636-1,964,208 | + | C1H7g05719 | C2H7g04010 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| CX7g048543 | 7:1,966,166-1,966,672 | + | C1H7g05719 | C2H7g04010 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| CX7g048364 | 7:1,973,916-1,974,350 | + | C1H7g05719 | C2H7g10792 | LOC_Os07g04960 | Os07g0142600 | - | Detail |