| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g01335 | 9:3,289,050-3,290,751 | - | C1H9g14985 | CX9g055027 | LOC_Os09g07020 | Os09g0245500 | - | Detail |
| C2H9g28734 | 9:3,292,410-3,297,012 | - | C1H9g14985 | CX9g055027 | LOC_Os09g07450 | Os09g0245500 | - | Detail |
| C2H9g02331 | 9:3,298,992-3,299,303 | - | C1H9g18619 | - | - | - | - | Detail |
| C2H9g06448 | 9:3,302,793-3,306,557 | - | C1H9g27878 | CX9g057597 | LOC_Os09g07460 | Os09g0249000 | - | Detail |
| C2H9g20745 | 9:3,316,134-3,319,656 | + | C1H9g24582 | CX9g056442 | LOC_Os09g07480 | Os09g0249400 | - | Detail |
| C2H9g06831 | 9:3,321,246-3,325,339 | - | C1H9g20835 | CX9g058158 | LOC_Os09g07500 | Os09g0249600 | - | Detail |
| C2H9g07458 | 9:3,328,817-3,335,150 | - | C1H9g20701 | CX9g054955 | LOC_Os09g07510 | Os09g0249700 | - | Detail |
| C2H9g12303 | 9:3,342,606-3,346,521 | + | C1H9g00474 | CX9g057433 | LOC_Os09g07570 | Os09g0249900 | - | Detail |
| C2H9g13423 | 9:3,347,479-3,356,560 | - | C1H9g08915 | CX9g058038 | LOC_Os09g07590 | - | - | Detail |
| C2H9g30220 | 9:3,451,766-3,453,788 | - | C1H9g11366 | - | - | - | - | Detail |
| C2H9g19501 | 9:3,461,474-3,475,487 | + | C1H9g03513 | CX9g055768 | LOC_Os03g06900 | Os03g0165000 | TOP3α | Detail |
| C2H9g12401 | 9:3,482,410-3,490,224 | + | C1H9g17448 | CX9g056142 | LOC_Os09g07660 | Os09g0250700 | - | Detail |
| C2H9g30619 | 9:3,496,448-3,499,501 | - | C1H9g00213 | CX9g056929 | LOC_Os09g07670 | Os09g0250800 | - | Detail |
| C2H9g12991 | 9:3,508,670-3,510,171 | - | C1H9g00213 | CX9g057043 | LOC_Os09g07700 | Os09g0250800 | - | Detail |
| C2H9g12996 | 9:3,524,430-3,525,449 | + | C1H9g26312 | CX9g056138 | LOC_Os09g07780 | Os09g0251500 | - | Detail |
| C2H9g15415 | 9:3,529,560-3,530,862 | + | C1H9g12000 | - | - | Os09g0251450 | - | Detail |
| C2H9g06665 | 9:3,550,379-3,554,009 | + | C1H9g31511 | CX9g057361 | LOC_Os09g07730 | Os09g0251100 | - | Detail |
| C2H9g25970 | 9:3,554,814-3,555,485 | + | C1H9g27075 | - | LOC_Os09g07720 | - | - | Detail |
| C2H9g10088 | 9:3,562,574-3,565,475 | + | C1H9g20803 | CX9g056095 | LOC_Os09g07800 | Os09g0251800 | - | Detail |
| C2H9g03841 | 9:3,572,171-3,575,276 | + | C1H9g11596 | CX9g056028 | LOC_Os09g07820 | Os09g0252000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049270 | 7:790,749-796,301 | + | C1H7g29824 | C2H7g24967 | LOC_Os07g02440 | Os07g0115300 | - | Detail |
| CX7g050040 | 7:798,775-801,405 | + | C1H7g12893 | C2H7g21396 | LOC_Os07g02450 | Os07g0468500 | - | Detail |
| CX7g050102 | 7:801,848-801,997 | - | - | - | - | - | - | Detail |
| CX7g048567 | 7:806,801-807,200 | + | C1H7g17438 | C2H7g05636 | LOC_Os07g02460 | Os07g0115500 | - | Detail |
| CX7g046201 | 7:812,508-815,295 | + | C1H7g26660 | C2H7g24825 | LOC_Os07g02470 | Os07g0115600 | - | Detail |
| CX7g048843 | 7:853,237-854,521 | - | C1H7g05374 | C2H7g00995 | LOC_Os07g02540 | Os07g0116600 | HHC7 | Detail |
| CX7g050253 | 7:859,289-859,450 | + | C1H1g21326 | C2H1g26585 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| CX7g049855 | 7:897,151-901,475 | - | C1H7g19098 | C2H7g25039 | LOC_Os07g02620 | Os07g0117300 | - | Detail |
| CX7g047078 | 7:916,801-917,082 | - | - | - | - | - | - | Detail |
| CX7g049253 | 7:917,681-918,109 | + | C1H11g17235 | C2H7g27503 | LOC_Os07g02690 | Os07g0118200 | - | Detail |
| CX7g048680 | 7:920,226-920,654 | + | C1H11g17235 | C2H7g06906 | LOC_Os07g02870 | Os07g0120000 | - | Detail |
| CX7g050222 | 7:922,162-925,303 | + | C1H7g16877 | C2H7g30126 | LOC_Os07g02710 | Os07g0118300 | - | Detail |
| CX7g048086 | 7:928,052-928,219 | - | - | - | - | - | - | Detail |
| CX7g048565 | 7:930,750-935,011 | + | C1H7g01332 | C2H7g02504 | LOC_Os07g02760 | Os07g0118800 | - | Detail |
| CX7g046747 | 7:935,669-938,580 | + | C1H7g00656 | C2H7g05412 | LOC_Os07g02770 | Os07g0118900 | - | Detail |
| CX7g046286 | 7:939,839-944,793 | - | C1H7g19978 | C2H7g29366 | LOC_Os07g02780 | Os07g0119000 | OsMAPKKK11 | Detail |
| CX7g047815 | 7:947,205-949,578 | + | C1H7g01105 | C2H7g13887 | LOC_Os07g02790 | Os07g0119100 | - | Detail |
| CX7g046639 | 7:960,817-960,993 | - | - | - | - | - | - | Detail |
| CX7g049284 | 7:969,432-970,940 | + | C1H7g31353 | C2H7g30652 | LOC_Os07g02800 | Os07g0119300 | - | Detail |
| CX7g047130 | 7:978,237-980,880 | + | C1H7g07353 | C2H7g30256 | LOC_Os07g02810 | Os07g0119400 | OsAAO3 | Detail |