| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g04657 | 5:7,919,966-7,930,152 | + | C2H5g07689 | CX5g040162 | LOC_Os05g17990 | Os10g0127700 | - | Detail |
| C1H5g22792 | 5:7,978,975-7,981,172 | - | C2H5g13658 | CX5g036945 | LOC_Os05g18294 | Os05g0267100 | OsSec14-27 | Detail |
| C1H5g16534 | 5:7,984,826-7,985,922 | - | - | - | - | - | - | Detail |
| C1H5g00261 | 5:7,991,262-7,992,383 | - | C2H5g30084 | CX5g037126 | - | - | - | Detail |
| C1H5g11057 | 5:7,995,110-7,999,187 | - | - | CX5g041077 | - | - | - | Detail |
| C1H5g23613 | 5:8,010,902-8,016,090 | + | - | - | - | - | - | Detail |
| C1H5g14126 | 5:8,018,266-8,021,352 | - | C2H5g02166 | CX5g040351 | LOC_Os05g18470 | Os05g0267800 | OsSec14-13 | Detail |
| C1H5g17826 | 5:8,042,828-8,043,288 | - | C2H5g24703 | CX5g039639 | - | Os05g0267900 | - | Detail |
| C1H5g02676 | 5:8,063,174-8,067,311 | + | C2H5g23620 | CX5g040409 | - | Os05g0268400 | - | Detail |
| C1H5g22785 | 5:8,072,026-8,079,306 | - | C2H5g05756 | CX5g040154 | LOC_Os05g18604 | Os05g0268500 | - | Detail |
| C1H5g01079 | 5:8,099,103-8,102,155 | - | C2H5g25305 | CX5g038524 | LOC_Os05g18660 | Os05g0269100 | - | Detail |
| C1H5g00417 | 5:8,106,025-8,108,323 | - | C2H5g16000 | CX5g037457 | LOC_Os05g18670 | Os05g0269200 | - | Detail |
| C1H5g29345 | 5:8,133,857-8,140,897 | - | C2H5g09440 | CX5g039610 | LOC_Os05g18730 | Os05g0269500 | OsGCS1, HAP2 | Detail |
| C1H5g06392 | 5:8,155,567-8,158,345 | - | C2H5g01291 | CX5g040303 | LOC_Os05g19110 | Os05g0273500 | - | Detail |
| C1H5g19255 | 5:8,166,294-8,169,034 | + | C2H5g27387 | CX5g040250 | LOC_Os05g19040 | Os05g0272900 | - | Detail |
| C1H5g00223 | 5:8,170,717-8,174,040 | - | C2H5g24419 | CX5g040752 | LOC_Os05g19030 | Os05g0272800 | - | Detail |
| C1H5g23932 | 5:8,181,860-8,184,381 | - | C2H5g02457 | CX5g040554 | LOC_Os05g19000 | Os05g0272200 | - | Detail |
| C1H5g22296 | 5:8,254,224-8,254,749 | - | C2H5g11842 | - | - | - | - | Detail |
| C1H5g29933 | 5:8,262,569-8,264,974 | - | C2H5g04829 | CX5g039511 | LOC_Os05g18850 | Os05g0271300 | - | Detail |
| C1H5g21508 | 5:8,448,769-8,451,006 | - | C2H5g06365 | CX5g038788 | LOC_Os05g18790 | Os05g0270800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046674 | 7:331,390-331,749 | + | C1H7g07437 | - | - | - | - | Detail |
| CX7g050182 | 7:331,973-332,380 | - | - | - | - | - | - | Detail |
| CX7g048074 | 7:336,106-336,306 | + | - | - | - | - | - | Detail |
| CX7g046133 | 7:341,272-344,304 | + | C1H7g25371 | C2H7g09963 | LOC_Os07g01710 | Os07g0107800 | - | Detail |
| CX7g046042 | 7:345,333-347,376 | + | C1H7g24674 | C2H7g09963 | LOC_Os07g01720 | Os07g0107900 | - | Detail |
| CX7g048990 | 7:348,200-353,271 | + | C1H7g24674 | C2H7g27112 | LOC_Os07g01730 | Os07g0108000 | - | Detail |
| CX7g050371 | 7:356,209-360,652 | - | C1H7g02419 | C2H7g21594 | LOC_Os07g01750 | Os07g0108200 | - | Detail |
| CX7g048284 | 7:362,554-373,062 | - | C1H7g29096 | C2H7g09384 | LOC_Os07g01780 | Os07g0108500 | - | Detail |
| CX7g049487 | 7:375,188-376,240 | + | - | C2H7g12262 | LOC_Os07g01800 | Os07g0480900 | - | Detail |
| CX7g047017 | 7:377,594-378,676 | + | - | C2H7g02864 | LOC_Os07g01810 | Os07g0108800 | TPKB, TPKb, OsTPKb | Detail |
| CX7g050402 | 7:381,856-387,754 | - | C1H7g22403 | C2H7g15497 | LOC_Os07g01820 | Os07g0108900 | DEP, FDRMADS3, MADS15, OsMADS15, RAP1A, RMADS215 | Detail |
| CX7g048092 | 7:410,746-411,519 | + | - | C2H3g14769 | - | - | - | Detail |
| CX7g046269 | 7:413,731-417,603 | - | C1H8g13175 | C2H4g04279 | LOC_Os06g36530 | - | - | Detail |
| CX7g047346 | 7:427,815-431,914 | + | C1H7g25065 | C2H7g09456 | LOC_Os07g01850 | Os07g0109300 | - | Detail |
| CX7g048897 | 7:437,452-442,613 | + | C1H7g30461 | C2H7g13268 | LOC_Os07g01860 | Os07g0109400 | SLG7-L2 | Detail |
| CX7g046958 | 7:444,860-446,306 | - | C1H7g15867 | C2H7g26360 | LOC_Os07g01870 | Os07g0109500 | - | Detail |
| CX7g047000 | 7:447,134-454,551 | - | C1H7g16403 | C2H7g13917 | LOC_Os07g01880 | Os07g0109600 | - | Detail |
| CX7g049565 | 7:457,482-457,881 | - | C1H7g10360 | - | LOC_Os07g01890 | Os07g0109700 | - | Detail |
| CX7g048348 | 7:458,195-459,763 | + | C1H7g00789 | C2H7g09342 | LOC_Os07g01900 | Os07g0109800 | - | Detail |
| CX7g050020 | 7:462,481-462,845 | + | C1H7g09861 | C2H7g02867 | LOC_Os07g01904 | Os07g0110000 | - | Detail |