| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17331 | 3:5,338,578-5,345,195 | + | C2H3g17746 | CX3g028416 | LOC_Os03g11520 | Os03g0213900 | - | Detail |
| C1H3g12951 | 3:5,345,585-5,351,080 | + | C2H3g08543 | CX3g030880 | LOC_Os03g11530 | Os03g0214000 | - | Detail |
| C1H3g14932 | 3:5,352,075-5,355,579 | + | C2H3g18859 | CX3g028514 | LOC_Os03g11540 | Os03g0214100 | OsRPA70b | Detail |
| C1H3g10644 | 3:5,356,021-5,361,678 | - | C2H3g25555 | CX3g029924 | LOC_Os03g11550 | Os03g0214200 | - | Detail |
| C1H3g04750 | 3:5,366,054-5,369,454 | - | C2H3g22606 | CX3g027534 | LOC_Os03g11560 | Os03g0214400 | - | Detail |
| C1H3g15538 | 3:5,371,578-5,375,503 | + | C2H3g22039 | CX3g027043 | LOC_Os03g11570 | Os03g0214600 | - | Detail |
| C1H3g09681 | 3:5,378,035-5,382,962 | - | C2H3g03744 | - | - | - | - | Detail |
| C1H3g00304 | 3:5,384,562-5,388,404 | - | C2H3g29664 | CX3g025722 | LOC_Os03g11590 | Os03g0215000 | - | Detail |
| C1H3g11825 | 3:5,415,400-5,421,453 | + | C2H3g24849 | CX3g029987 | LOC_Os03g11600 | Os03g0215200 | DL, dl(lop), lop, dl, dl1 | Detail |
| C1H3g00757 | 3:5,427,325-5,429,696 | - | C2H3g11270 | CX3g026708 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| C1H3g04456 | 3:5,435,446-5,435,640 | - | C2H3g18287 | CX3g026708 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| C1H3g30377 | 3:5,454,338-5,459,662 | + | C2H3g25916 | CX3g026583 | LOC_Os03g11650 | Os03g0215700 | - | Detail |
| C1H3g02997 | 3:5,460,442-5,463,830 | + | C2H3g12512 | CX3g026851 | LOC_Os03g11660 | Os03g0215800 | - | Detail |
| C1H3g12813 | 3:5,464,321-5,466,351 | - | C2H3g19342 | CX3g025630 | LOC_Os03g11670 | Os03g0215900 | OsPPR676, OsATP4 | Detail |
| C1H3g00186 | 3:5,474,194-5,475,087 | - | C2H3g13701 | CX3g030485 | LOC_Os03g11680 | Os03g0216000 | - | Detail |
| C1H3g15045 | 3:5,488,251-5,490,104 | + | C2H3g30038 | CX3g027591 | LOC_Os03g11690 | Os03g0216300 | - | Detail |
| C1H3g15740 | 3:5,491,793-5,492,971 | - | C2H3g05049 | CX3g029865 | LOC_Os03g11700 | Os03g0216400 | - | Detail |
| C1H3g17461 | 3:5,494,130-5,495,182 | - | C2H3g19799 | CX3g030660 | LOC_Os03g11710 | Os03g0216500 | - | Detail |
| C1H3g21782 | 3:5,501,406-5,505,435 | + | C2H3g02073 | CX3g030548 | LOC_Os03g11720 | Os03g0216600 | - | Detail |
| C1H3g16227 | 3:5,506,130-5,517,012 | - | C2H3g12443 | CX3g029221 | LOC_Os03g11734 | Os03g0216700 | OsFRDL1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043265 | 6:26,699,634-26,701,939 | + | C1H6g24116 | C2H6g03613 | LOC_Os06g50240 | Os06g0716200 | - | Detail |
| CX6g041622 | 6:26,702,191-26,704,374 | - | C1H6g20858 | C2H6g24995 | LOC_Os06g50250 | Os06g0716467 | - | Detail |
| CX6g042424 | 6:26,705,827-26,711,337 | - | C1H6g22907 | C2H6g07088 | LOC_Os06g50300 | Os06g0716700 | - | Detail |
| CX6g041687 | 6:26,714,937-26,715,755 | - | C1H6g03645 | C2H6g21294 | LOC_Os06g50310 | Os06g0716800 | - | Detail |
| CX6g041671 | 6:26,718,565-26,721,250 | - | C1H6g08882 | C2H6g28994 | LOC_Os06g50330 | Os06g0717100 | - | Detail |
| CX6g042212 | 6:26,722,177-26,726,749 | - | C1H6g26067 | C2H6g26642 | LOC_Os06g50340 | Os06g0717200 | FON1 | Detail |
| CX6g045029 | 6:26,732,109-26,732,318 | + | - | - | - | - | - | Detail |
| CX6g044193 | 6:26,733,958-26,734,233 | + | C1H6g24203 | C2H6g03771 | LOC_Os06g50350 | Os06g0717300 | - | Detail |
| CX6g043233 | 6:26,736,384-26,739,442 | - | C1H6g26535 | C2H6g11097 | LOC_Os06g50360 | Os06g0717400 | - | Detail |
| CX6g044654 | 6:26,747,824-26,750,349 | + | C1H6g11168 | C2H6g06329 | LOC_Os06g50370 | Os06g0717600 | - | Detail |
| CX6g042111 | 6:26,751,662-26,754,277 | - | C1H6g02180 | C2H6g29972 | LOC_Os06g50380 | Os06g0717800 | - | Detail |
| CX6g041593 | 6:26,764,075-26,766,670 | + | C1H6g12787 | C2H6g12324 | LOC_Os06g50390 | Os06g0717900 | - | Detail |
| CX6g045196 | 6:26,775,156-26,776,023 | + | C1H6g28933 | C2H6g23852 | LOC_Os06g50400 | Os06g0718100 | - | Detail |
| CX6g045106 | 6:26,776,896-26,778,122 | - | C1H6g11029 | C2H6g14031 | LOC_Os06g50410 | Os06g0718300 | - | Detail |
| CX6g043688 | 6:26,788,625-26,790,755 | + | C1H6g27071 | C2H6g25837 | LOC_Os06g50742 | Os06g0719600 | - | Detail |
| CX6g041955 | 6:26,795,028-26,797,911 | - | C1H6g03080 | C2H6g09082 | LOC_Os06g50830 | Os06g0719500 | - | Detail |
| CX6g044473 | 6:26,802,093-26,807,413 | + | C1H6g00051 | C2H6g19919 | LOC_Os06g50840 | Os06g0724100 | - | Detail |
| CX6g045246 | 6:26,808,253-26,810,311 | + | C1H6g00051 | C2H6g19919 | LOC_Os06g50850 | Os06g0724200 | - | Detail |
| CX6g044030 | 6:26,810,858-26,813,654 | - | C1H6g19086 | C2H6g24940 | LOC_Os06g50860 | Os06g0724300 | - | Detail |
| CX6g041511 | 6:26,814,379-26,816,443 | - | C1H6g18113 | C2H6g07069 | LOC_Os06g50870 | Os06g0724400 | - | Detail |