| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g08969 | 4:13,218,956-13,221,228 | + | C2H4g25025 | CX4g036238 | LOC_Os04g27990 | Os04g0346900 | - | Detail |
| C1H4g15107 | 4:13,225,358-13,232,659 | + | C2H4g18236 | CX4g033642 | LOC_Os04g28010 | Os04g0347600 | - | Detail |
| C1H4g05294 | 4:13,237,937-13,242,997 | - | - | - | - | - | - | Detail |
| C1H4g03410 | 4:13,478,427-13,482,579 | - | C2H6g18608 | CX6g044432 | - | Os12g0632401 | - | Detail |
| C1H4g19418 | 4:13,536,308-13,543,244 | + | C2H4g16562 | CX4g032157 | LOC_Os04g28020 | Os04g0347800 | PRD1 | Detail |
| C1H4g22332 | 4:13,551,105-13,556,761 | + | C2H4g25578 | CX4g033951 | LOC_Os04g28040 | Os04g0347900 | - | Detail |
| C1H4g13797 | 4:13,559,425-13,564,556 | + | C2H4g20901 | CX4g033086 | LOC_Os04g28050 | Os04g0348000 | - | Detail |
| C1H4g24314 | 4:13,563,743-13,566,873 | - | C2H4g08837 | CX4g034188 | LOC_Os04g28060 | Os04g0348100 | - | Detail |
| C1H4g16463 | 4:13,574,904-13,582,287 | + | C2H4g13837 | CX4g035633 | LOC_Os04g28090 | Os04g0348300 | - | Detail |
| C1H4g18035 | 4:13,586,454-13,589,500 | - | C2H4g14798 | CX4g036157 | LOC_Os04g28100 | Os04g0348400 | OsPUB7 | Detail |
| C1H4g07136 | 4:13,598,759-13,601,214 | + | C2H4g14319 | - | LOC_Os04g28120 | Os04g0348600 | - | Detail |
| C1H4g27011 | 4:13,610,302-13,613,546 | + | C2H4g18470 | - | LOC_Os04g28130 | Os04g0348800 | - | Detail |
| C1H4g23299 | 4:13,626,130-13,629,312 | + | C2H4g29280 | - | LOC_Os04g28160 | Os04g0348800 | - | Detail |
| C1H4g18144 | 4:13,635,805-13,639,280 | - | C2H4g00376 | CX4g035408 | LOC_Os04g28170 | Os04g0349401 | - | Detail |
| C1H4g07697 | 4:13,641,848-13,643,962 | - | C2H4g26754 | CX4g032516 | LOC_Os04g28180 | Os04g0349500 | - | Detail |
| C1H4g08997 | 4:13,661,222-13,666,019 | - | C2H4g11001 | CX4g034310 | LOC_Os04g28210 | Os04g0349700 | - | Detail |
| C1H4g05397 | 4:13,678,190-13,680,673 | + | C2H4g17175 | CX4g034236 | LOC_Os04g28234 | Os04g0350000 | - | Detail |
| C1H4g22441 | 4:13,698,927-13,706,233 | + | C2H4g23045 | CX4g035357 | LOC_Os04g28260 | Os04g0350300 | - | Detail |
| C1H4g22936 | 4:13,724,316-13,727,239 | - | C2H4g11650 | CX4g032228 | LOC_Os04g28280 | Os04g0350700 | AN1, An-1, OsbHLH093, RAE1, An-1/RAE1, RAE1/An-1, Awn4-2 | Detail |
| C1H4g19111 | 4:13,731,769-13,732,047 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043738 | 6:26,605,579-26,606,013 | - | C1H6g10648 | C2H6g06613 | LOC_Os06g50040 | Os06g0714300 | - | Detail |
| CX6g043874 | 6:26,612,480-26,612,947 | + | C1H6g16405 | C2H6g21793 | - | - | - | Detail |
| CX6g042192 | 6:26,620,871-26,621,122 | + | - | - | - | - | - | Detail |
| CX6g042358 | 6:26,626,109-26,629,124 | + | C1H6g16010 | C2H6g05445 | LOC_Os06g50050 | Os06g0714500 | - | Detail |
| CX6g044204 | 6:26,629,727-26,630,395 | - | C1H6g13097 | C2H6g10555 | LOC_Os06g50060 | Os06g0714600 | OsPRA2 | Detail |
| CX6g044692 | 6:26,634,143-26,634,652 | + | C1H6g19044 | C2H6g21497 | LOC_Os06g50080 | Os06g0714800 | - | Detail |
| CX6g041883 | 6:26,639,653-26,639,965 | - | C1H6g17004 | C2H6g14966 | LOC_Os06g50090 | - | - | Detail |
| CX6g045381 | 6:26,640,641-26,643,157 | - | C1H6g14885 | C2H6g13472 | LOC_Os06g50100 | Os06g0714900 | - | Detail |
| CX6g044866 | 6:26,643,522-26,643,800 | + | - | - | - | Os06g0714951 | - | Detail |
| CX6g045152 | 6:26,647,058-26,650,689 | + | C1H6g12343 | C2H6g19684 | LOC_Os06g50110 | Os06g0715000 | - | Detail |
| CX6g045632 | 6:26,651,876-26,654,784 | - | C1H6g17214 | C2H6g13051 | LOC_Os06g50120 | Os06g0715100 | OsNPSN11 | Detail |
| CX6g041238 | 6:26,656,993-26,657,574 | + | C1H6g21684 | - | LOC_Os06g50130 | Os06g0715200 | - | Detail |
| CX6g042488 | 6:26,658,781-26,660,870 | - | C1H6g24910 | C2H6g30614 | LOC_Os06g50140 | Os06g0715300 | - | Detail |
| CX6g043292 | 6:26,661,923-26,664,706 | + | C1H6g19558 | C2H6g23697 | LOC_Os06g50146 | Os06g0715400 | - | Detail |
| CX6g043745 | 6:26,665,484-26,668,493 | + | C1H6g22509 | C2H6g22072 | LOC_Os06g50154 | Os06g0715500 | - | Detail |
| CX6g044107 | 6:26,671,326-26,675,716 | - | C1H6g28252 | C2H6g12480 | LOC_Os06g50170 | Os06g0715600 | - | Detail |
| CX6g041175 | 6:26,677,638-26,681,029 | - | C1H6g25941 | C2H6g11669 | LOC_Os06g50180 | Os06g0715700 | - | Detail |
| CX6g042040 | 6:26,686,179-26,686,331 | + | - | - | - | - | - | Detail |
| CX6g043052 | 6:26,689,393-26,694,809 | + | C1H6g13735 | C2H6g30186 | LOC_Os06g50220 | Os06g0716000 | - | Detail |
| CX6g044257 | 6:26,696,793-26,697,206 | + | C1H6g12469 | C2H6g02865 | - | Os06g0716100 | - | Detail |