| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g20868 | 1:13,450,520-13,452,544 | - | - | - | - | Os01g0363950 | - | Detail |
| C2H1g23536 | 1:13,466,336-13,470,655 | + | C1H1g24145 | CX1g003575 | LOC_Os01g26174 | Os01g0364100 | - | Detail |
| C2H1g08431 | 1:13,500,059-13,502,591 | + | C1H1g15351 | CX1g003575 | LOC_Os01g26280 | Os01g0364800 | - | Detail |
| C2H1g01263 | 1:13,503,741-13,504,202 | - | - | CX1g006377 | - | - | - | Detail |
| C2H1g09218 | 1:13,511,084-13,513,790 | - | C1H1g00820 | CX1g000721 | LOC_Os01g26300 | Os01g0365000 | - | Detail |
| C2H1g10812 | 1:13,527,952-13,528,373 | - | C1H1g31120 | CX1g002129 | LOC_Os01g26310 | Os01g0365000 | - | Detail |
| C2H1g14612 | 1:13,547,883-13,550,252 | + | C1H1g24989 | CX1g000363 | LOC_Os01g26320 | Os01g0365300 | - | Detail |
| C2H1g19606 | 1:13,550,254-13,551,390 | + | C1H1g24989 | CX1g003444 | LOC_Os01g26320 | Os01g0365300 | - | Detail |
| C2H1g05597 | 1:13,561,516-13,563,405 | + | C1H1g13742 | CX1g002863 | LOC_Os01g26340 | Os01g0351500 | - | Detail |
| C2H1g01583 | 1:13,586,152-13,588,029 | + | - | - | - | Os10g0340100 | - | Detail |
| C2H1g08702 | 1:13,648,948-13,652,151 | + | C1H1g28775 | CX1g000084 | LOC_Os01g26390 | Os01g0366300 | Gnk2RLK-1 | Detail |
| C2H1g28276 | 1:13,653,448-13,655,490 | + | - | - | - | - | - | Detail |
| C2H1g18380 | 1:13,683,525-13,684,394 | - | C1H1g08262 | CX1g002303 | LOC_Os01g26920 | Os01g0367100 | - | Detail |
| C2H1g06533 | 1:13,687,142-13,688,920 | - | C1H1g25979 | CX1g004427 | LOC_Os01g26970 | Os01g0367100 | - | Detail |
| C2H1g18954 | 1:13,693,647-13,699,807 | - | C1H1g15445 | CX1g006237 | LOC_Os01g26940 | Os01g0367300 | - | Detail |
| C2H1g00335 | 1:13,704,344-13,708,942 | - | C1H1g15374 | CX1g002303 | LOC_Os01g26970 | Os01g0367400 | - | Detail |
| C2H1g03369 | 1:13,731,084-13,738,099 | + | C1H1g21458 | CX1g003934 | LOC_Os01g27020 | Os01g0367700 | - | Detail |
| C2H1g04184 | 1:13,745,523-13,752,855 | - | C1H1g24923 | CX1g006855 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| C2H1g05311 | 1:13,771,028-13,772,062 | + | C1H1g29900 | CX1g000728 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| C2H1g23898 | 1:13,791,146-13,803,780 | - | C1H1g21071 | CX1g002302 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002571 | 1:25,921,548-25,922,760 | - | C1H1g05936 | C2H1g17786 | LOC_Os01g50610 | Os01g0701700 | - | Detail |
| CX1g004457 | 1:25,941,428-25,946,139 | - | C1H1g20752 | C2H1g19350 | LOC_Os01g50616 | Os01g0701900 | OsSec14-2 | Detail |
| CX1g004072 | 1:25,947,545-25,950,328 | - | C1H1g26463 | C2H1g18139 | LOC_Os01g50622 | Os01g0702000 | - | Detail |
| CX1g003239 | 1:25,961,937-25,966,466 | + | C1H1g05751 | C2H1g10406 | LOC_Os01g50680 | Os01g0702300 | - | Detail |
| CX1g006280 | 1:25,968,375-25,975,013 | + | C1H1g11882 | C2H1g19625 | LOC_Os01g50690 | Os01g0702400 | - | Detail |
| CX1g001215 | 1:25,975,894-25,979,204 | + | C1H1g16231 | C2H1g05807 | LOC_Os01g50700 | Os01g0702450 | - | Detail |
| CX1g002995 | 1:25,989,228-25,990,373 | - | C1H1g24141 | C2H1g04286 | LOC_Os01g50720 | Os01g0702700 | Os2R_MYB12, JAdMYB1 | Detail |
| CX1g002161 | 1:26,006,508-26,008,131 | + | C1H1g18010 | C2H1g09112 | LOC_Os01g50750 | Os01g0703300 | - | Detail |
| CX1g001207 | 1:26,017,745-26,021,744 | + | C1H1g02622 | C2H1g03589 | LOC_Os01g50760 | Os01g0703400 | OsFPS1, FPPS | Detail |
| CX1g001914 | 1:26,025,410-26,028,753 | + | C1H1g25322 | C2H1g19007 | LOC_Os01g50770 | Os01g0703600 | - | Detail |
| CX1g002500 | 1:26,033,852-26,034,599 | - | C1H1g14210 | C2H1g22277 | LOC_Os01g50810 | Os01g0704000 | OsPMEI4 | Detail |
| CX1g004065 | 1:26,050,558-26,053,140 | + | C1H1g12969 | C2H1g22213 | LOC_Os01g50830 | Os01g0704200 | - | Detail |
| CX1g001183 | 1:26,058,910-26,059,080 | + | - | - | - | - | - | Detail |
| CX1g003124 | 1:26,061,254-26,062,534 | - | - | - | LOC_Os01g50840 | Os01g0704300 | - | Detail |
| CX1g006371 | 1:26,100,685-26,105,000 | + | C1H1g06033 | C2H1g12065 | LOC_Os01g50860 | Os01g0704700 | - | Detail |
| CX1g004301 | 1:26,110,747-26,112,977 | + | C1H1g25213 | C2H1g15823 | LOC_Os01g50900 | Os01g0705100 | - | Detail |
| CX1g000838 | 1:26,113,661-26,114,519 | - | C1H1g21576 | C2H1g26032 | LOC_Os01g50910 | Os01g0705200 | - | Detail |
| CX1g004197 | 1:26,115,915-26,116,070 | - | - | - | - | Os01g0709750 | - | Detail |
| CX1g007241 | 1:26,121,197-26,121,355 | - | - | - | - | - | - | Detail |
| CX1g001929 | 1:26,125,004-26,127,497 | - | C1H1g05260 | C2H1g29456 | LOC_Os01g50930 | Os01g0705300 | - | Detail |