| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g10131 | 3:32,710,447-32,717,455 | + | C1H3g17861 | CX3g030956 | LOC_Os03g63650 | Os03g0853500 | OsBRXL2, OsBRXL4 | Detail |
| C2H3g04339 | 3:32,717,834-32,722,925 | - | C1H3g31296 | CX3g026797 | LOC_Os03g63660 | Os03g0853600 | - | Detail |
| C2H3g06882 | 3:32,727,382-32,730,249 | - | C1H3g27569 | CX3g030543 | LOC_Os03g63670 | Os03g0853700 | - | Detail |
| C2H3g26724 | 3:32,730,665-32,732,233 | + | C1H3g11918 | CX3g027709 | LOC_Os03g63680 | Os03g0853800 | - | Detail |
| C2H3g11272 | 3:32,733,216-32,735,515 | - | C1H3g26162 | CX3g030379 | LOC_Os03g63690 | Os03g0853900 | - | Detail |
| C2H3g01478 | 3:32,735,845-32,736,411 | + | - | CX3g026480 | LOC_Os03g63700 | Os03g0854000 | - | Detail |
| C2H3g19461 | 3:32,737,690-32,744,794 | - | C1H3g07991 | CX3g030851 | LOC_Os03g63710 | Os03g0854100 | - | Detail |
| C2H3g12825 | 3:32,744,981-32,748,169 | + | C1H3g06335 | CX3g030107 | LOC_Os03g63730 | Os03g0854300 | - | Detail |
| C2H3g15962 | 3:32,748,649-32,749,188 | - | - | CX3g028502 | LOC_Os03g63740 | Os03g0854400 | - | Detail |
| C2H3g05253 | 3:32,750,311-32,754,281 | + | C1H3g09693 | CX3g030892 | LOC_Os03g63750 | Os03g0854500 | - | Detail |
| C2H3g28167 | 3:32,756,363-32,757,538 | - | C1H3g19243 | CX3g029838 | LOC_Os03g63760 | Os03g0854600 | - | Detail |
| C2H3g30198 | 3:32,763,087-32,768,651 | - | C1H3g21186 | CX3g026422 | LOC_Os03g63770 | Os03g0854800 | - | Detail |
| C2H3g20473 | 3:32,781,834-32,784,244 | + | C1H3g26705 | CX3g029874 | LOC_Os03g63810 | Os03g0855100 | OsWRKY80 | Detail |
| C2H3g14845 | 3:32,785,704-32,786,183 | + | C1H3g13485 | CX3g029874 | LOC_Os03g63810 | Os03g0855100 | OsWRKY80 | Detail |
| C2H3g28127 | 3:32,801,173-32,802,288 | + | C1H3g14280 | CX3g029132 | LOC_Os03g63850 | Os03g0855500 | - | Detail |
| C2H3g23266 | 3:32,803,017-32,806,480 | + | C1H3g01539 | CX3g027978 | LOC_Os03g63860 | Os03g0855600 | - | Detail |
| C2H3g09898 | 3:32,813,856-32,814,953 | + | C1H3g10625 | CX3g027688 | LOC_Os03g63900 | Os03g0856000 | - | Detail |
| C2H3g04375 | 3:32,818,787-32,820,898 | + | C1H3g25641 | CX3g031335 | LOC_Os03g63910 | Os03g0856100 | - | Detail |
| C2H3g05256 | 3:32,821,698-32,830,143 | + | - | CX3g031335 | LOC_Os03g63910 | Os03g0856150 | - | Detail |
| C2H3g28643 | 3:32,830,440-32,832,471 | - | C1H3g22746 | CX3g030579 | LOC_Os03g63930 | Os03g0856300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042299 | 6:26,223,396-26,225,502 | + | C1H6g24113 | C2H6g01709 | LOC_Os06g49230 | Os06g0705600 | - | Detail |
| CX6g045693 | 6:26,238,128-26,240,863 | + | C1H6g24113 | C2H6g07764 | LOC_Os06g49240 | Os06g0706100 | - | Detail |
| CX6g044738 | 6:26,243,804-26,247,313 | + | C1H6g07579 | C2H6g16936 | LOC_Os06g49230 | Os06g0706400 | OsPTR9 | Detail |
| CX6g043317 | 6:26,249,924-26,253,953 | - | C1H6g06492 | C2H6g22144 | LOC_Os06g49260 | Os06g0706600 | - | Detail |
| CX6g045688 | 6:26,255,954-26,256,298 | - | C1H6g17051 | - | LOC_Os06g49290 | Os06g0706700 | - | Detail |
| CX6g045701 | 6:26,257,132-26,259,009 | - | C1H6g14791 | C2H6g07496 | LOC_Os06g49300 | Os06g0707000 | XYXT1 | Detail |
| CX6g042851 | 6:26,262,001-26,265,967 | + | C1H6g07781 | C2H6g02584 | LOC_Os06g49310 | Os06g0707100 | - | Detail |
| CX6g044744 | 6:26,269,097-26,270,703 | - | C1H6g30332 | C2H6g28355 | LOC_Os06g49320 | Os06g0707200 | OsXAT4 | Detail |
| CX6g042622 | 6:26,270,854-26,271,144 | + | - | - | - | Os06g0707250 | - | Detail |
| CX6g043747 | 6:26,274,496-26,275,923 | - | C1H6g13202 | C2H6g12497 | LOC_Os06g49340 | Os06g0707300 | - | Detail |
| CX6g043432 | 6:26,279,273-26,283,757 | - | C1H6g20503 | C2H6g09646 | LOC_Os06g49360 | Os06g0707350 | - | Detail |
| CX6g043180 | 6:26,295,186-26,301,896 | - | C1H6g28599 | C2H6g02972 | LOC_Os06g49390 | Os06g0707733 | - | Detail |
| CX6g042732 | 6:26,324,066-26,328,276 | + | C1H6g17358 | C2H6g06263 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| CX6g043918 | 6:26,330,202-26,334,698 | - | C1H6g07108 | C2H6g00786 | LOC_Os06g49440 | Os06g0708100 | - | Detail |
| CX6g045323 | 6:26,334,771-26,335,568 | + | - | C2H10g00951 | - | - | - | Detail |
| CX6g041443 | 6:26,336,201-26,342,299 | + | C1H6g25506 | C2H6g22817 | LOC_Os06g49450 | Os06g0708200 | OsMTOPVIB | Detail |
| CX6g042713 | 6:26,343,152-26,344,479 | + | C1H6g16157 | C2H6g13876 | LOC_Os06g49460 | Os06g0708300 | - | Detail |
| CX6g043935 | 6:26,346,152-26,347,980 | + | C1H6g26774 | C2H6g01779 | LOC_Os06g49470 | Os06g0708400 | CYP19-4, OsCYP19-4, OsCYP-16, OsCYP19-3 | Detail |
| CX6g042472 | 6:26,349,224-26,351,426 | + | C1H6g04243 | C2H6g06908 | LOC_Os06g49480 | Os06g0708500 | - | Detail |
| CX6g044847 | 6:26,352,332-26,352,673 | + | C1H6g02518 | - | LOC_Os06g49490 | Os06g0708600 | - | Detail |