| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17700 | 3:32,584,264-32,592,042 | - | C2H3g08860 | CX3g030882 | LOC_Os03g61760 | Os03g0833300 | - | Detail |
| C1H3g21260 | 3:32,603,812-32,606,126 | + | C2H3g22487 | CX3g027103 | LOC_Os03g61780 | Os03g0833600 | - | Detail |
| C1H3g24854 | 3:32,607,429-32,610,061 | - | C2H3g12767 | CX3g026261 | LOC_Os03g61790 | Os03g0833700 | - | Detail |
| C1H3g23913 | 3:32,615,103-32,619,505 | + | C2H3g17593 | CX3g027106 | LOC_Os03g61800 | Os03g0833800 | - | Detail |
| C1H3g05954 | 3:32,620,034-32,622,418 | - | C2H3g26209 | CX3g030666 | LOC_Os03g61810 | Os03g0833900 | - | Detail |
| C1H3g10834 | 3:32,624,366-32,629,561 | + | C2H3g03990 | CX3g026929 | - | Os03g0834000 | - | Detail |
| C1H3g31529 | 3:32,631,777-32,632,844 | + | C2H3g15596 | CX3g027959 | LOC_Os03g61829 | Os03g0834050 | OsHAD1 | Detail |
| C1H3g22428 | 3:32,634,557-32,636,521 | - | C2H3g11398 | CX3g029113 | LOC_Os03g61840 | Os03g0295300 | - | Detail |
| C1H3g14322 | 3:32,640,045-32,645,439 | + | C2H3g11446 | CX3g028534 | LOC_Os03g61890 | Os03g0835100 | - | Detail |
| C1H3g03072 | 3:32,651,945-32,655,142 | + | C2H3g28021 | CX3g026121 | LOC_Os03g61920 | Os03g0835400 | - | Detail |
| C1H3g01425 | 3:32,655,308-32,662,468 | - | C2H3g05961 | CX3g025800 | LOC_Os03g61930 | Os03g0835600 | - | Detail |
| C1H3g31427 | 3:32,663,330-32,663,998 | - | C2H3g01805 | CX3g025270 | LOC_Os03g61940 | Os03g0835700 | - | Detail |
| C1H3g11697 | 3:32,664,957-32,671,034 | + | C2H3g09738 | CX3g026666 | LOC_Os03g61950 | Os03g0835800 | GPA3 | Detail |
| C1H3g21220 | 3:32,673,295-32,673,756 | + | C2H3g22082 | CX3g029438 | LOC_Os03g61960 | Os03g0835900 | - | Detail |
| C1H3g16687 | 3:32,675,202-32,679,147 | - | C2H3g02537 | CX3g027328 | LOC_Os03g61970 | Os03g0836000 | - | Detail |
| C1H3g24245 | 3:32,681,729-32,684,037 | + | C2H3g00553 | CX3g025105 | LOC_Os03g61980 | Os03g0602300 | OsBRD1, OsDWARF | Detail |
| C1H3g15438 | 3:32,684,186-32,687,466 | - | C2H3g22451 | CX3g025476 | LOC_Os03g61990 | Os03g0836200 | - | Detail |
| C1H3g19672 | 3:32,695,959-32,697,242 | - | C2H3g24609 | CX3g028617 | LOC_Os03g62030 | Os03g0836500 | - | Detail |
| C1H3g28661 | 3:32,706,276-32,709,013 | + | C2H3g00356 | CX3g026385 | LOC_Os03g62060 | Os03g0836800 | OsAH6 | Detail |
| C1H3g07688 | 3:32,709,726-32,714,718 | - | C2H3g05839 | CX3g028024 | LOC_Os03g62080 | Os03g0837000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042299 | 6:26,223,396-26,225,502 | + | C1H6g24113 | C2H6g01709 | LOC_Os06g49230 | Os06g0705600 | - | Detail |
| CX6g045693 | 6:26,238,128-26,240,863 | + | C1H6g24113 | C2H6g07764 | LOC_Os06g49240 | Os06g0706100 | - | Detail |
| CX6g044738 | 6:26,243,804-26,247,313 | + | C1H6g07579 | C2H6g16936 | LOC_Os06g49230 | Os06g0706400 | OsPTR9 | Detail |
| CX6g043317 | 6:26,249,924-26,253,953 | - | C1H6g06492 | C2H6g22144 | LOC_Os06g49260 | Os06g0706600 | - | Detail |
| CX6g045688 | 6:26,255,954-26,256,298 | - | C1H6g17051 | - | LOC_Os06g49290 | Os06g0706700 | - | Detail |
| CX6g045701 | 6:26,257,132-26,259,009 | - | C1H6g14791 | C2H6g07496 | LOC_Os06g49300 | Os06g0707000 | XYXT1 | Detail |
| CX6g042851 | 6:26,262,001-26,265,967 | + | C1H6g07781 | C2H6g02584 | LOC_Os06g49310 | Os06g0707100 | - | Detail |
| CX6g044744 | 6:26,269,097-26,270,703 | - | C1H6g30332 | C2H6g28355 | LOC_Os06g49320 | Os06g0707200 | OsXAT4 | Detail |
| CX6g042622 | 6:26,270,854-26,271,144 | + | - | - | - | Os06g0707250 | - | Detail |
| CX6g043747 | 6:26,274,496-26,275,923 | - | C1H6g13202 | C2H6g12497 | LOC_Os06g49340 | Os06g0707300 | - | Detail |
| CX6g043432 | 6:26,279,273-26,283,757 | - | C1H6g20503 | C2H6g09646 | LOC_Os06g49360 | Os06g0707350 | - | Detail |
| CX6g043180 | 6:26,295,186-26,301,896 | - | C1H6g28599 | C2H6g02972 | LOC_Os06g49390 | Os06g0707733 | - | Detail |
| CX6g042732 | 6:26,324,066-26,328,276 | + | C1H6g17358 | C2H6g06263 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| CX6g043918 | 6:26,330,202-26,334,698 | - | C1H6g07108 | C2H6g00786 | LOC_Os06g49440 | Os06g0708100 | - | Detail |
| CX6g045323 | 6:26,334,771-26,335,568 | + | - | C2H10g00951 | - | - | - | Detail |
| CX6g041443 | 6:26,336,201-26,342,299 | + | C1H6g25506 | C2H6g22817 | LOC_Os06g49450 | Os06g0708200 | OsMTOPVIB | Detail |
| CX6g042713 | 6:26,343,152-26,344,479 | + | C1H6g16157 | C2H6g13876 | LOC_Os06g49460 | Os06g0708300 | - | Detail |
| CX6g043935 | 6:26,346,152-26,347,980 | + | C1H6g26774 | C2H6g01779 | LOC_Os06g49470 | Os06g0708400 | CYP19-4, OsCYP19-4, OsCYP-16, OsCYP19-3 | Detail |
| CX6g042472 | 6:26,349,224-26,351,426 | + | C1H6g04243 | C2H6g06908 | LOC_Os06g49480 | Os06g0708500 | - | Detail |
| CX6g044847 | 6:26,352,332-26,352,673 | + | C1H6g02518 | - | LOC_Os06g49490 | Os06g0708600 | - | Detail |