| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g02815 | 3:16,130,550-16,134,927 | + | C2H3g06341 | CX3g030906 | LOC_Os03g31000 | Os03g0424000 | - | Detail |
| C1H3g00527 | 3:16,136,354-16,137,842 | + | C2H3g06341 | CX3g030906 | LOC_Os03g31000 | Os03g0424200 | - | Detail |
| C1H3g12825 | 3:16,139,570-16,144,126 | + | C2H3g24636 | CX3g027986 | LOC_Os03g31010 | Os03g0423800 | - | Detail |
| C1H3g17862 | 3:16,147,826-16,154,065 | - | C2H3g06341 | CX3g028309 | LOC_Os03g31044 | Os03g0424000 | - | Detail |
| C1H3g03536 | 3:16,204,969-16,205,398 | + | C2H3g29625 | CX3g028983 | - | Os03g0424300 | - | Detail |
| C1H3g03549 | 3:16,206,760-16,213,888 | + | C2H3g29941 | CX3g026843 | LOC_Os03g31090 | Os03g0424800 | - | Detail |
| C1H3g27057 | 3:16,211,973-16,217,082 | - | - | CX3g028435 | LOC_Os03g32190 | Os03g0424600 | - | Detail |
| C1H3g15507 | 3:16,228,835-16,230,254 | + | C2H3g29941 | CX9g057750 | LOC_Os03g31090 | Os03g0424500 | - | Detail |
| C1H3g06288 | 3:16,233,844-16,237,189 | + | C2H3g02070 | CX3g026843 | LOC_Os03g31150 | Os03g0425000 | - | Detail |
| C1H3g23569 | 3:16,237,760-16,240,886 | - | C2H3g13373 | CX3g026358 | LOC_Os03g31170 | Os03g0425200 | - | Detail |
| C1H3g07104 | 3:16,247,215-16,253,043 | + | C2H3g29562 | CX3g025115 | LOC_Os03g31180 | Os03g0425300 | - | Detail |
| C1H3g07332 | 3:16,258,508-16,260,378 | + | C2H3g24938 | CX3g030946 | LOC_Os03g31210 | Os03g0425600 | - | Detail |
| C1H3g20426 | 3:16,272,767-16,276,427 | + | C2H3g12524 | CX3g025387 | LOC_Os03g31230 | Os03g0425800 | - | Detail |
| C1H3g22127 | 3:16,295,382-16,299,157 | - | C2H3g01389 | CX3g029401 | LOC_Os03g31260 | Os03g0426300 | - | Detail |
| C1H3g16780 | 3:16,315,519-16,318,741 | + | C2H3g18833 | CX3g025661 | LOC_Os03g31290 | Os03g0426800 | - | Detail |
| C1H3g17321 | 3:16,328,669-16,335,694 | + | C2H3g26583 | CX3g031265 | LOC_Os03g31300 | Os03g0426900 | - | Detail |
| C1H3g18318 | 3:16,362,578-16,364,335 | + | C2H3g22373 | CX3g030459 | LOC_Os03g31360 | Os03g0427300 | - | Detail |
| C1H3g10283 | 3:16,369,867-16,376,963 | + | C2H3g13790 | CX3g031010 | LOC_Os03g31400 | Os03g0427900 | - | Detail |
| C1H3g31158 | 3:16,381,111-16,385,850 | - | C2H3g18509 | CX3g026162 | LOC_Os03g31430 | Os03g0428200 | - | Detail |
| C1H3g02780 | 3:16,442,818-16,445,737 | + | C2H3g05528 | CX3g027331 | LOC_Os03g31490 | Os03g0428800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042299 | 6:26,223,396-26,225,502 | + | C1H6g24113 | C2H6g01709 | LOC_Os06g49230 | Os06g0705600 | - | Detail |
| CX6g045693 | 6:26,238,128-26,240,863 | + | C1H6g24113 | C2H6g07764 | LOC_Os06g49240 | Os06g0706100 | - | Detail |
| CX6g044738 | 6:26,243,804-26,247,313 | + | C1H6g07579 | C2H6g16936 | LOC_Os06g49230 | Os06g0706400 | OsPTR9 | Detail |
| CX6g043317 | 6:26,249,924-26,253,953 | - | C1H6g06492 | C2H6g22144 | LOC_Os06g49260 | Os06g0706600 | - | Detail |
| CX6g045688 | 6:26,255,954-26,256,298 | - | C1H6g17051 | - | LOC_Os06g49290 | Os06g0706700 | - | Detail |
| CX6g045701 | 6:26,257,132-26,259,009 | - | C1H6g14791 | C2H6g07496 | LOC_Os06g49300 | Os06g0707000 | XYXT1 | Detail |
| CX6g042851 | 6:26,262,001-26,265,967 | + | C1H6g07781 | C2H6g02584 | LOC_Os06g49310 | Os06g0707100 | - | Detail |
| CX6g044744 | 6:26,269,097-26,270,703 | - | C1H6g30332 | C2H6g28355 | LOC_Os06g49320 | Os06g0707200 | OsXAT4 | Detail |
| CX6g042622 | 6:26,270,854-26,271,144 | + | - | - | - | Os06g0707250 | - | Detail |
| CX6g043747 | 6:26,274,496-26,275,923 | - | C1H6g13202 | C2H6g12497 | LOC_Os06g49340 | Os06g0707300 | - | Detail |
| CX6g043432 | 6:26,279,273-26,283,757 | - | C1H6g20503 | C2H6g09646 | LOC_Os06g49360 | Os06g0707350 | - | Detail |
| CX6g043180 | 6:26,295,186-26,301,896 | - | C1H6g28599 | C2H6g02972 | LOC_Os06g49390 | Os06g0707733 | - | Detail |
| CX6g042732 | 6:26,324,066-26,328,276 | + | C1H6g17358 | C2H6g06263 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| CX6g043918 | 6:26,330,202-26,334,698 | - | C1H6g07108 | C2H6g00786 | LOC_Os06g49440 | Os06g0708100 | - | Detail |
| CX6g045323 | 6:26,334,771-26,335,568 | + | - | C2H10g00951 | - | - | - | Detail |
| CX6g041443 | 6:26,336,201-26,342,299 | + | C1H6g25506 | C2H6g22817 | LOC_Os06g49450 | Os06g0708200 | OsMTOPVIB | Detail |
| CX6g042713 | 6:26,343,152-26,344,479 | + | C1H6g16157 | C2H6g13876 | LOC_Os06g49460 | Os06g0708300 | - | Detail |
| CX6g043935 | 6:26,346,152-26,347,980 | + | C1H6g26774 | C2H6g01779 | LOC_Os06g49470 | Os06g0708400 | CYP19-4, OsCYP19-4, OsCYP-16, OsCYP19-3 | Detail |
| CX6g042472 | 6:26,349,224-26,351,426 | + | C1H6g04243 | C2H6g06908 | LOC_Os06g49480 | Os06g0708500 | - | Detail |
| CX6g044847 | 6:26,352,332-26,352,673 | + | C1H6g02518 | - | LOC_Os06g49490 | Os06g0708600 | - | Detail |