| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g31167 | 3:19,737,581-19,739,813 | - | C2H3g06732 | CX3g029172 | LOC_Os03g37580 | Os03g0572300 | - | Detail |
| C1H3g08142 | 3:19,753,885-19,761,137 | - | C2H3g26206 | CX3g027413 | LOC_Os03g37640 | Os03g0572900 | - | Detail |
| C1H3g26725 | 3:19,798,113-19,803,119 | - | C2H3g09050 | CX3g027370 | LOC_Os03g37720 | Os03g0573500 | - | Detail |
| C1H3g02923 | 3:19,854,552-19,861,516 | - | C2H3g00015 | CX3g027506 | LOC_Os03g37830 | Os03g0574900 | - | Detail |
| C1H3g18240 | 3:19,886,601-19,891,234 | - | C2H3g16573 | CX3g028769 | LOC_Os03g37840 | Os03g0575200 | OsHAK16 | Detail |
| C1H3g26043 | 3:19,941,255-19,945,568 | - | C2H3g27235 | CX3g030121 | LOC_Os03g37930 | Os03g0576200 | OsHAK21 | Detail |
| C1H3g08766 | 3:19,957,973-19,959,961 | + | C2H3g10576 | CX3g030987 | LOC_Os03g37950 | Os03g0576400 | - | Detail |
| C1H3g15699 | 3:19,964,484-19,966,551 | - | C2H3g18995 | CX3g026483 | LOC_Os03g37970 | Os03g0576700 | - | Detail |
| C1H3g19877 | 3:19,969,805-19,972,084 | + | C2H3g21429 | CX3g026173 | LOC_Os03g37984 | Os03g0576900 | - | Detail |
| C1H3g30693 | 3:19,972,898-19,975,185 | - | C2H3g11896 | CX3g027490 | LOC_Os03g38000 | Os03g0577000 | - | Detail |
| C1H3g06968 | 3:19,982,104-19,986,112 | - | C2H3g00105 | CX3g026618 | LOC_Os03g38010 | Os03g0577100 | - | Detail |
| C1H3g02838 | 3:19,988,603-19,992,309 | + | C2H3g29757 | CX3g026777 | LOC_Os03g38020 | Os03g0577200 | OsMOB1A | Detail |
| C1H3g25648 | 3:20,003,766-20,009,054 | - | C2H3g00261 | CX3g027636 | LOC_Os03g38050 | Os03g0577500 | - | Detail |
| C1H3g02199 | 3:20,018,119-20,018,334 | + | C2H3g26479 | - | - | Os03g0577800 | - | Detail |
| C1H3g19294 | 3:20,018,335-20,018,690 | + | C2H3g27615 | - | LOC_Os03g38090 | - | - | Detail |
| C1H3g30456 | 3:20,045,347-20,051,461 | - | C2H3g08089 | CX3g030883 | LOC_Os03g38120 | Os03g0578200 | - | Detail |
| C1H3g15761 | 3:20,095,891-20,096,383 | - | - | - | LOC_Os03g41480 | - | - | Detail |
| C1H3g02259 | 3:20,099,449-20,101,225 | - | - | CX5g039361 | - | - | - | Detail |
| C1H3g00373 | 3:20,113,238-20,115,904 | + | C2H3g01736 | CX3g028677 | LOC_Os03g38210 | Os03g0578900 | OsGAMYBL2 | Detail |
| C1H3g03850 | 3:20,128,191-20,132,178 | - | C2H3g08135 | CX3g031078 | LOC_Os03g38230 | Os03g0579000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042435 | 6:26,116,651-26,116,800 | - | - | - | - | Os01g0728000 | - | Detail |
| CX6g045783 | 6:26,117,209-26,119,991 | + | C1H6g29648 | C2H6g15424 | LOC_Os06g49030 | Os06g0703800 | - | Detail |
| CX6g041497 | 6:26,120,656-26,120,814 | + | - | - | - | - | - | Detail |
| CX6g044966 | 6:26,130,452-26,132,628 | + | C1H6g07308 | C2H6g26654 | LOC_Os06g49040 | Os06g0703900 | - | Detail |
| CX6g045465 | 6:26,134,705-26,137,666 | + | C1H6g07308 | C2H6g26654 | LOC_Os06g49050 | Os06g0704000 | - | Detail |
| CX6g043942 | 6:26,139,786-26,142,625 | + | C1H6g31643 | C2H6g01098 | LOC_Os06g49060 | Os06g0704100 | - | Detail |
| CX6g043513 | 6:26,143,908-26,144,251 | - | C1H6g21776 | C2H6g14094 | LOC_Os06g49070 | Os06g0704200 | - | Detail |
| CX6g042446 | 6:26,145,040-26,147,919 | + | C1H6g04818 | C2H6g09929 | LOC_Os06g49080 | Os06g0704300 | C3H46, OsC3H46, LIC, OsLIC | Detail |
| CX6g045885 | 6:26,150,423-26,156,324 | + | C1H6g07512 | C2H6g08437 | LOC_Os06g49090 | Os06g0704400 | - | Detail |
| CX6g044421 | 6:26,161,801-26,163,426 | + | C1H6g27120 | C2H6g13363 | LOC_Os06g49100 | Os06g0704500 | - | Detail |
| CX6g045141 | 6:26,165,232-26,168,872 | - | C1H6g00037 | C2H6g08289 | LOC_Os06g49110 | Os06g0704600 | - | Detail |
| CX6g043594 | 6:26,170,196-26,174,238 | - | C1H6g20822 | C2H6g04274 | LOC_Os06g49120 | Os06g0704700 | - | Detail |
| CX6g043593 | 6:26,175,725-26,188,287 | - | C1H6g30381 | C2H6g29592 | LOC_Os06g49130 | Os06g0704800 | OsHAC704, OsHAC12 | Detail |
| CX6g041788 | 6:26,189,606-26,192,320 | + | C1H6g14385 | C2H6g27374 | LOC_Os06g49140 | Os06g0704900 | - | Detail |
| CX6g041568 | 6:26,194,120-26,196,004 | + | C1H6g27051 | C2H6g16318 | LOC_Os06g49150 | Os06g0705000 | OsGMT1 | Detail |
| CX6g041902 | 6:26,197,237-26,198,310 | + | C1H6g17550 | C2H6g07212 | LOC_Os06g49160 | Os06g0705100 | - | Detail |
| CX6g044278 | 6:26,199,153-26,203,092 | - | C1H6g05795 | C2H6g22144 | LOC_Os06g49170 | Os06g0705200 | - | Detail |
| CX6g041917 | 6:26,206,795-26,215,294 | - | C1H6g13928 | C2H6g27734 | LOC_Os06g49185 | Os06g0705300 | - | Detail |
| CX6g044181 | 6:26,216,725-26,216,895 | + | C1H6g11993 | - | LOC_Os06g49190 | Os06g0705400 | - | Detail |
| CX6g043522 | 6:26,217,519-26,218,530 | - | C1H6g17037 | C2H6g17976 | LOC_Os06g49200 | Os06g0705500 | - | Detail |