| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10011 | 1:5,088,615-5,090,934 | + | C2H1g13509 | CX1g000819 | LOC_Os01g10820 | Os01g0205500 | - | Detail |
| C1H1g14161 | 1:5,092,774-5,096,953 | - | C2H1g23870 | CX1g005006 | LOC_Os01g10840 | Os01g0205700 | OsGSK1 | Detail |
| C1H1g29186 | 1:5,108,007-5,109,563 | + | C2H1g26064 | CX1g004213 | LOC_Os01g10850 | Os01g0205900 | - | Detail |
| C1H1g14349 | 1:5,114,157-5,116,663 | - | C2H1g07122 | CX1g004112 | LOC_Os01g10860 | Os01g0206200 | - | Detail |
| C1H1g26102 | 1:5,123,712-5,124,019 | + | C2H1g26046 | CX1g000067 | LOC_Os01g10880 | Os01g0206600 | - | Detail |
| C1H1g13675 | 1:5,130,888-5,134,524 | - | C2H1g21997 | CX1g006766 | LOC_Os01g10900 | Os01g0206800 | - | Detail |
| C1H1g27430 | 1:5,134,360-5,134,779 | + | C2H1g22901 | - | - | Os01g0207001 | - | Detail |
| C1H1g29711 | 1:5,137,480-5,139,285 | - | C2H1g18153 | CX1g005481 | LOC_Os01g10920 | Os01g0207200 | - | Detail |
| C1H1g26757 | 1:5,139,927-5,141,783 | - | C2H1g15053 | CX1g005600 | LOC_Os01g10930 | Os01g0207200 | - | Detail |
| C1H1g01947 | 1:5,149,302-5,151,140 | - | C2H1g00526 | CX1g002931 | LOC_Os01g10960 | Os01g0207600 | - | Detail |
| C1H1g18999 | 1:5,152,259-5,153,051 | + | C2H1g21950 | CX1g000352 | LOC_Os01g10970 | Os01g0207900 | - | Detail |
| C1H1g20276 | 1:5,155,792-5,156,539 | + | C2H1g18529 | CX1g000352 | LOC_Os01g10970 | Os01g0207700 | - | Detail |
| C1H1g25528 | 1:5,163,053-5,163,676 | + | - | - | - | - | - | Detail |
| C1H1g26781 | 1:5,164,019-5,165,466 | + | C2H1g21935 | CX1g000352 | LOC_Os01g10980 | Os01g0207900 | - | Detail |
| C1H1g25464 | 1:5,170,032-5,171,583 | + | C2H1g29674 | CX1g005883 | LOC_Os01g10990 | Os01g0208000 | - | Detail |
| C1H1g11853 | 1:5,180,501-5,182,286 | + | C2H1g12071 | CX1g000352 | LOC_Os01g10970 | Os01g0207900 | - | Detail |
| C1H1g28948 | 1:5,200,833-5,208,588 | + | C2H1g19708 | CX1g005878 | LOC_Os01g11040 | Os01g0208600 | - | Detail |
| C1H1g05716 | 1:5,209,967-5,214,728 | + | C2H1g22516 | CX1g006828 | LOC_Os01g11054 | Os01g0208700 | Osppc4 | Detail |
| C1H1g21624 | 1:5,215,206-5,220,318 | + | C2H1g01505 | CX1g004331 | LOC_Os01g11070 | Os01g0209000 | - | Detail |
| C1H1g24219 | 1:5,225,098-5,228,141 | + | C2H1g10245 | CX1g001114 | LOC_Os01g11110 | Os01g0209200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042435 | 6:26,116,651-26,116,800 | - | - | - | - | Os01g0728000 | - | Detail |
| CX6g045783 | 6:26,117,209-26,119,991 | + | C1H6g29648 | C2H6g15424 | LOC_Os06g49030 | Os06g0703800 | - | Detail |
| CX6g041497 | 6:26,120,656-26,120,814 | + | - | - | - | - | - | Detail |
| CX6g044966 | 6:26,130,452-26,132,628 | + | C1H6g07308 | C2H6g26654 | LOC_Os06g49040 | Os06g0703900 | - | Detail |
| CX6g045465 | 6:26,134,705-26,137,666 | + | C1H6g07308 | C2H6g26654 | LOC_Os06g49050 | Os06g0704000 | - | Detail |
| CX6g043942 | 6:26,139,786-26,142,625 | + | C1H6g31643 | C2H6g01098 | LOC_Os06g49060 | Os06g0704100 | - | Detail |
| CX6g043513 | 6:26,143,908-26,144,251 | - | C1H6g21776 | C2H6g14094 | LOC_Os06g49070 | Os06g0704200 | - | Detail |
| CX6g042446 | 6:26,145,040-26,147,919 | + | C1H6g04818 | C2H6g09929 | LOC_Os06g49080 | Os06g0704300 | C3H46, OsC3H46, LIC, OsLIC | Detail |
| CX6g045885 | 6:26,150,423-26,156,324 | + | C1H6g07512 | C2H6g08437 | LOC_Os06g49090 | Os06g0704400 | - | Detail |
| CX6g044421 | 6:26,161,801-26,163,426 | + | C1H6g27120 | C2H6g13363 | LOC_Os06g49100 | Os06g0704500 | - | Detail |
| CX6g045141 | 6:26,165,232-26,168,872 | - | C1H6g00037 | C2H6g08289 | LOC_Os06g49110 | Os06g0704600 | - | Detail |
| CX6g043594 | 6:26,170,196-26,174,238 | - | C1H6g20822 | C2H6g04274 | LOC_Os06g49120 | Os06g0704700 | - | Detail |
| CX6g043593 | 6:26,175,725-26,188,287 | - | C1H6g30381 | C2H6g29592 | LOC_Os06g49130 | Os06g0704800 | OsHAC704, OsHAC12 | Detail |
| CX6g041788 | 6:26,189,606-26,192,320 | + | C1H6g14385 | C2H6g27374 | LOC_Os06g49140 | Os06g0704900 | - | Detail |
| CX6g041568 | 6:26,194,120-26,196,004 | + | C1H6g27051 | C2H6g16318 | LOC_Os06g49150 | Os06g0705000 | OsGMT1 | Detail |
| CX6g041902 | 6:26,197,237-26,198,310 | + | C1H6g17550 | C2H6g07212 | LOC_Os06g49160 | Os06g0705100 | - | Detail |
| CX6g044278 | 6:26,199,153-26,203,092 | - | C1H6g05795 | C2H6g22144 | LOC_Os06g49170 | Os06g0705200 | - | Detail |
| CX6g041917 | 6:26,206,795-26,215,294 | - | C1H6g13928 | C2H6g27734 | LOC_Os06g49185 | Os06g0705300 | - | Detail |
| CX6g044181 | 6:26,216,725-26,216,895 | + | C1H6g11993 | - | LOC_Os06g49190 | Os06g0705400 | - | Detail |
| CX6g043522 | 6:26,217,519-26,218,530 | - | C1H6g17037 | C2H6g17976 | LOC_Os06g49200 | Os06g0705500 | - | Detail |