| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g06554 | 1:1,267,481-1,270,261 | - | C1H1g14698 | CX1g000136 | LOC_Os01g03640 | Os01g0127200 | OsLPR5, OsSTA2 | Detail |
| C2H1g21958 | 1:1,273,959-1,277,999 | - | C1H1g30854 | CX1g005762 | LOC_Os01g03650 | Os01g0127300 | - | Detail |
| C2H1g24576 | 1:1,278,156-1,280,615 | + | C1H1g00412 | CX1g003465 | LOC_Os01g03660 | Os01g0127400 | - | Detail |
| C2H1g17865 | 1:1,282,083-1,282,775 | + | C1H1g25838 | CX1g002042 | LOC_Os01g19970 | Os01g0127450 | - | Detail |
| C2H1g02319 | 1:1,283,305-1,284,401 | + | C1H1g17663 | CX1g005179 | LOC_Os01g03670 | Os01g0127500 | OsTKPR2 | Detail |
| C2H1g19770 | 1:1,285,305-1,285,871 | + | C1H1g11231 | CX1g002886 | LOC_Os01g03680 | Os01g0127600 | - | Detail |
| C2H1g03781 | 1:1,288,272-1,291,329 | + | C1H1g05668 | CX1g006285 | LOC_Os01g03690 | Os01g0127700 | - | Detail |
| C2H1g13836 | 1:1,297,101-1,302,164 | + | C1H1g08835 | CX1g004218 | LOC_Os01g03710 | Os01g0127900 | - | Detail |
| C2H1g25959 | 1:1,312,131-1,313,344 | - | C1H1g25654 | CX1g002896 | LOC_Os01g03720 | Os01g0128000 | MYB1, Os2R_MYB1 | Detail |
| C2H1g01385 | 1:1,324,388-1,326,037 | - | C1H1g31764 | CX1g004405 | LOC_Os01g03740 | Os01g0128100 | - | Detail |
| C2H1g18960 | 1:1,326,807-1,329,714 | + | C1H1g04042 | CX1g004550 | LOC_Os01g03730 | Os01g0128200 | - | Detail |
| C2H1g15883 | 1:1,329,952-1,330,824 | - | C1H1g30874 | CX1g002239 | LOC_Os01g03750 | Os01g0128300 | MHZ4 | Detail |
| C2H1g19347 | 1:1,331,825-1,337,142 | - | C1H1g07436 | CX1g006333 | LOC_Os01g03760 | Os01g0128400 | - | Detail |
| C2H1g18545 | 1:1,345,364-1,353,485 | + | C1H1g20521 | CX1g003056 | LOC_Os01g03820 | Os01g0128800 | - | Detail |
| C2H1g10390 | 1:1,366,798-1,368,202 | + | C1H1g27481 | CX1g002103 | LOC_Os01g03840 | Os01g0129200 | SL1, sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB | Detail |
| C2H1g17049 | 1:1,379,470-1,382,437 | - | C1H1g30507 | CX1g003490 | LOC_Os01g03870 | Os01g0129500 | - | Detail |
| C2H1g13371 | 1:1,395,250-1,396,259 | + | C1H1g11492 | CX1g006241 | LOC_Os01g03890 | Os01g0129600 | - | Detail |
| C2H1g20654 | 1:1,408,458-1,408,763 | - | - | CX1g003157 | LOC_Os01g03900 | Os01g0129800 | - | Detail |
| C2H1g29639 | 1:1,411,780-1,414,851 | - | C1H1g30416 | CX1g005809 | LOC_Os01g03914 | Os01g0130000 | - | Detail |
| C2H1g19941 | 1:1,416,854-1,417,432 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041978 | 6:25,684,749-25,685,592 | + | - | - | LOC_Os06g48220 | Os06g0697300 | - | Detail |
| CX6g044343 | 6:25,686,840-25,689,123 | - | C1H6g08925 | C2H6g09402 | LOC_Os06g48230 | Os06g0697400 | - | Detail |
| CX6g042789 | 6:25,689,203-25,689,391 | + | - | C2H6g17891 | LOC_Os06g48235 | Os06g0698000 | - | Detail |
| CX6g045475 | 6:25,693,746-25,695,308 | - | - | - | - | - | - | Detail |
| CX6g042686 | 6:25,698,075-25,699,733 | - | C1H6g05037 | C2H6g27095 | LOC_Os06g48250 | Os06g0697600 | OsAAA-ATPase3 | Detail |
| CX6g041589 | 6:25,707,288-25,708,382 | - | C1H6g22098 | C2H6g16662 | LOC_Os06g48290 | Os06g0698200 | - | Detail |
| CX6g043495 | 6:25,716,843-25,718,980 | - | C1H6g12139 | C2H6g22057 | LOC_Os06g48300 | Os06g0698300 | - | Detail |
| CX6g041555 | 6:25,719,994-25,720,662 | + | - | C2H6g12235 | LOC_Os06g48310 | Os06g0698400 | - | Detail |
| CX6g044756 | 6:25,726,334-25,727,407 | - | C1H6g02243 | C2H6g08508 | LOC_Os06g48320 | Os06g0698500 | - | Detail |
| CX6g044097 | 6:25,740,328-25,742,319 | + | C1H6g28256 | C2H6g09378 | LOC_Os06g48330 | Os06g0698600 | - | Detail |
| CX6g043633 | 6:25,744,033-25,745,385 | - | C1H6g09472 | C2H9g24688 | LOC_Os06g48355 | Os06g0698674 | - | Detail |
| CX6g041663 | 6:25,752,168-25,752,446 | - | C1H6g29169 | - | - | Os06g0698711 | - | Detail |
| CX6g045199 | 6:25,752,543-25,753,239 | + | C1H6g29243 | C2H6g28438 | - | - | - | Detail |
| CX6g043111 | 6:25,758,362-25,762,406 | + | C1H6g28600 | C2H6g07791 | LOC_Os06g48510 | Os06g0698785 | OsCMO | Detail |
| CX6g041163 | 6:25,763,485-25,766,569 | - | C1H6g16400 | C2H6g00629 | LOC_Os06g48520 | Os06g0698812 | - | Detail |
| CX6g041581 | 6:25,766,415-25,766,615 | + | - | - | - | Os06g0698822 | - | Detail |
| CX6g042411 | 6:25,768,291-25,775,008 | - | C1H6g29320 | C2H6g05312 | LOC_Os06g48530 | Os06g0698859 | Du13 | Detail |
| CX6g041225 | 6:25,777,142-25,781,293 | - | C1H6g30614 | C2H6g07714 | LOC_Os06g48534 | Os06g0698900 | - | Detail |
| CX6g042241 | 6:25,788,277-25,789,810 | + | C1H6g12443 | C2H6g12400 | LOC_Os06g48560 | Os06g0699100 | - | Detail |
| CX6g041318 | 6:25,790,699-25,792,982 | - | C1H6g20110 | C2H6g18550 | LOC_Os06g48570 | Os06g0699200 | - | Detail |