| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g15691 | 2:18,518,729-18,530,008 | - | C2H2g20323 | CX2g022806 | LOC_Os02g32660 | Os02g0528200 | SBE3, SBEIII*, SBEIII, Sbe3, RBE3, QEIIa, QEIIA, BEIIb, BEIIB, SBEIIb, OsBEIIb, sbe3, SBE III | Detail |
| C1H2g29366 | 2:18,540,315-18,542,956 | - | C2H2g15285 | CX2g024606 | LOC_Os02g32690 | Os02g0318450 | - | Detail |
| C1H2g14806 | 2:18,546,359-18,556,471 | - | C2H2g15285 | CX2g020306 | LOC_Os02g32690 | Os02g0528900 | - | Detail |
| C1H2g11870 | 2:18,557,962-18,558,666 | - | C2H2g20296 | - | LOC_Os02g32700 | - | - | Detail |
| C1H2g12236 | 2:18,560,447-18,562,253 | - | - | - | - | - | - | Detail |
| C1H2g00920 | 2:18,571,975-18,576,501 | + | C2H2g10414 | CX2g022433 | LOC_Os02g32730 | Os02g0529400 | - | Detail |
| C1H2g24766 | 2:18,578,241-18,579,947 | + | C2H2g18145 | CX2g020157 | LOC_Os02g32740 | Os02g0529500 | - | Detail |
| C1H2g22581 | 2:18,590,623-18,592,115 | - | C2H2g17400 | CX2g023637 | LOC_Os02g32760 | Os02g0529700 | - | Detail |
| C1H2g07352 | 2:18,593,618-18,601,188 | - | C2H2g26264 | CX2g021706 | LOC_Os02g32770 | Os02g0529800 | - | Detail |
| C1H2g17686 | 2:18,610,094-18,611,375 | - | C2H2g27061 | CX2g021636 | LOC_Os02g32814 | Os02g0530100 | - | Detail |
| C1H2g06488 | 2:18,618,849-18,619,328 | + | C2H2g29992 | CX2g020180 | LOC_Os02g32840 | Os02g0530300 | OsSAP5 | Detail |
| C1H2g03635 | 2:18,636,340-18,636,609 | + | C2H2g28791 | CX2g021909 | LOC_Os02g32850 | Os02g0530500 | - | Detail |
| C1H2g17644 | 2:18,641,166-18,646,101 | - | C2H2g06644 | CX2g021102 | LOC_Os02g32860 | Os02g0530600 | - | Detail |
| C1H2g20262 | 2:18,652,232-18,659,840 | + | C2H2g13474 | CX2g023644 | LOC_Os02g32930 | Os02g0531200 | - | Detail |
| C1H2g17709 | 2:18,669,439-18,670,607 | - | C2H2g09518 | CX2g023678 | LOC_Os02g32950 | Os02g0531600 | RCN2 | Detail |
| C1H2g28902 | 2:18,685,577-18,690,879 | + | C2H2g15698 | CX2g019431 | LOC_Os02g32970 | Os04g0411800 | - | Detail |
| C1H2g22832 | 2:18,714,021-18,717,719 | + | C2H2g22707 | CX2g023689 | LOC_Os02g33000 | Os02g0532900 | - | Detail |
| C1H2g16813 | 2:18,717,827-18,723,569 | - | C2H2g18655 | CX2g019017 | LOC_Os02g33010 | Os02g0533000 | - | Detail |
| C1H2g00080 | 2:18,727,159-18,729,594 | + | C2H2g19682 | CX2g024724 | LOC_Os02g33020 | Os02g0533200 | - | Detail |
| C1H2g31211 | 2:18,730,871-18,733,216 | + | C2H2g19682 | CX2g023010 | LOC_Os02g33030 | Os02g0533300 | OsalphaCA1, OsαCA1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041978 | 6:25,684,749-25,685,592 | + | - | - | LOC_Os06g48220 | Os06g0697300 | - | Detail |
| CX6g044343 | 6:25,686,840-25,689,123 | - | C1H6g08925 | C2H6g09402 | LOC_Os06g48230 | Os06g0697400 | - | Detail |
| CX6g042789 | 6:25,689,203-25,689,391 | + | - | C2H6g17891 | LOC_Os06g48235 | Os06g0698000 | - | Detail |
| CX6g045475 | 6:25,693,746-25,695,308 | - | - | - | - | - | - | Detail |
| CX6g042686 | 6:25,698,075-25,699,733 | - | C1H6g05037 | C2H6g27095 | LOC_Os06g48250 | Os06g0697600 | OsAAA-ATPase3 | Detail |
| CX6g041589 | 6:25,707,288-25,708,382 | - | C1H6g22098 | C2H6g16662 | LOC_Os06g48290 | Os06g0698200 | - | Detail |
| CX6g043495 | 6:25,716,843-25,718,980 | - | C1H6g12139 | C2H6g22057 | LOC_Os06g48300 | Os06g0698300 | - | Detail |
| CX6g041555 | 6:25,719,994-25,720,662 | + | - | C2H6g12235 | LOC_Os06g48310 | Os06g0698400 | - | Detail |
| CX6g044756 | 6:25,726,334-25,727,407 | - | C1H6g02243 | C2H6g08508 | LOC_Os06g48320 | Os06g0698500 | - | Detail |
| CX6g044097 | 6:25,740,328-25,742,319 | + | C1H6g28256 | C2H6g09378 | LOC_Os06g48330 | Os06g0698600 | - | Detail |
| CX6g043633 | 6:25,744,033-25,745,385 | - | C1H6g09472 | C2H9g24688 | LOC_Os06g48355 | Os06g0698674 | - | Detail |
| CX6g041663 | 6:25,752,168-25,752,446 | - | C1H6g29169 | - | - | Os06g0698711 | - | Detail |
| CX6g045199 | 6:25,752,543-25,753,239 | + | C1H6g29243 | C2H6g28438 | - | - | - | Detail |
| CX6g043111 | 6:25,758,362-25,762,406 | + | C1H6g28600 | C2H6g07791 | LOC_Os06g48510 | Os06g0698785 | OsCMO | Detail |
| CX6g041163 | 6:25,763,485-25,766,569 | - | C1H6g16400 | C2H6g00629 | LOC_Os06g48520 | Os06g0698812 | - | Detail |
| CX6g041581 | 6:25,766,415-25,766,615 | + | - | - | - | Os06g0698822 | - | Detail |
| CX6g042411 | 6:25,768,291-25,775,008 | - | C1H6g29320 | C2H6g05312 | LOC_Os06g48530 | Os06g0698859 | Du13 | Detail |
| CX6g041225 | 6:25,777,142-25,781,293 | - | C1H6g30614 | C2H6g07714 | LOC_Os06g48534 | Os06g0698900 | - | Detail |
| CX6g042241 | 6:25,788,277-25,789,810 | + | C1H6g12443 | C2H6g12400 | LOC_Os06g48560 | Os06g0699100 | - | Detail |
| CX6g041318 | 6:25,790,699-25,792,982 | - | C1H6g20110 | C2H6g18550 | LOC_Os06g48570 | Os06g0699200 | - | Detail |