| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03998 | 1:2,164,077-2,165,131 | - | C1H1g29078 | CX1g003888 | LOC_Os01g05370 | Os01g0144800 | - | Detail |
| C2H1g05408 | 1:2,174,818-2,178,246 | + | C1H1g29078 | CX1g003888 | LOC_Os01g05410 | Os01g0147001 | - | Detail |
| C2H1g08018 | 1:2,185,334-2,189,822 | + | C1H1g18605 | CX1g000323 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| C2H1g25573 | 1:2,191,220-2,194,402 | + | C1H1g08705 | CX1g001325 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| C2H1g12465 | 1:2,194,554-2,196,403 | - | C1H1g07217 | CX1g003030 | LOC_Os01g05440 | Os01g0147400 | - | Detail |
| C2H1g27793 | 1:2,197,356-2,199,409 | - | C1H1g03816 | - | LOC_Os01g05450 | Os01g0147600 | - | Detail |
| C2H1g00931 | 1:2,200,826-2,203,456 | - | C1H1g25686 | - | LOC_Os01g05460 | Os01g0147600 | - | Detail |
| C2H1g02244 | 1:2,205,153-2,207,498 | - | C1H1g30607 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C2H1g25353 | 1:2,210,513-2,219,278 | - | C1H1g11928 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C2H1g29480 | 1:2,221,494-2,225,565 | - | C1H1g17304 | CX1g005120 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| C2H1g30066 | 1:2,226,864-2,230,987 | - | C1H1g08404 | CX1g006525 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| C2H1g25150 | 1:2,236,272-2,249,202 | + | C1H1g03903 | CX1g001423 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| C2H1g10498 | 1:2,256,405-2,259,371 | - | C1H1g24472 | CX1g005368 | LOC_Os01g05620 | Os01g0149500 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59 | Detail |
| C2H1g18971 | 1:2,261,730-2,262,191 | + | C1H1g09766 | CX1g005739 | LOC_Os01g05630 | Os01g0149600 | H2B | Detail |
| C2H1g06791 | 1:2,263,340-2,266,739 | - | C1H1g22469 | CX1g006643 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| C2H1g28846 | 1:2,268,550-2,269,982 | - | C1H1g18521 | - | LOC_Os01g05650 | Os01g0149800 | - | Detail |
| C2H1g25044 | 1:2,274,627-2,278,471 | - | C1H1g17924 | CX1g006502 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| C2H1g00511 | 1:2,283,854-2,287,505 | - | C1H1g30008 | CX1g002286 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| C2H1g17834 | 1:2,289,627-2,293,258 | + | C1H1g15806 | CX1g000079 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| C2H1g21300 | 1:2,294,207-2,296,973 | + | C1H1g24721 | CX4g035052 | LOC_Os01g05694 | Os01g0150200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045936 | 6:25,540,435-25,542,381 | + | C1H6g19207 | C2H6g00488 | LOC_Os06g47920 | Os06g0694300 | - | Detail |
| CX6g045378 | 6:25,543,112-25,544,489 | - | C1H6g15840 | C2H6g21559 | LOC_Os06g47930 | Os06g0694400 | - | Detail |
| CX6g042018 | 6:25,548,477-25,549,434 | + | C1H6g14631 | C2H6g20159 | LOC_Os06g47940 | Os06g0694500 | - | Detail |
| CX6g044084 | 6:25,550,041-25,551,495 | - | C1H6g11152 | C2H6g21873 | LOC_Os06g47950 | Os06g0694600 | - | Detail |
| CX6g043107 | 6:25,552,297-25,552,900 | + | - | - | - | - | - | Detail |
| CX6g041709 | 6:25,555,147-25,556,209 | - | C1H6g16129 | C2H6g17824 | LOC_Os06g47970 | Os06g0694800 | - | Detail |
| CX6g042590 | 6:25,559,279-25,560,743 | + | C1H6g24635 | C2H6g04786 | LOC_Os06g48000 | Os06g0695200 | - | Detail |
| CX6g045449 | 6:25,566,106-25,568,464 | - | C1H6g27295 | C2H6g23077 | LOC_Os06g48010 | Os06g0695300 | - | Detail |
| CX6g045003 | 6:25,577,959-25,580,372 | + | C1H6g22856 | C2H6g04958 | LOC_Os06g48020 | Os06g0695400 | - | Detail |
| CX6g043360 | 6:25,589,467-25,590,088 | - | C1H6g06805 | - | - | - | - | Detail |
| CX6g043601 | 6:25,597,624-25,602,656 | + | C1H6g17302 | C2H6g12694 | LOC_Os06g48030 | Os06g0695500 | - | Detail |
| CX6g045698 | 6:25,607,830-25,610,238 | - | C1H6g13893 | C2H6g26512 | LOC_Os06g48040 | Os06g0695600 | OsMAR1 | Detail |
| CX6g041666 | 6:25,618,161-25,619,537 | + | C1H6g14725 | - | LOC_Os06g48050 | Os06g0695700 | - | Detail |
| CX6g043064 | 6:25,620,523-25,624,050 | - | C1H6g20833 | C2H6g12199 | LOC_Os06g48060 | Os06g0695800 | STAR1, OsENA2, OsABCI12 | Detail |
| CX6g041940 | 6:25,627,307-25,628,491 | - | C1H6g23654 | C2H6g02871 | LOC_Os06g48065 | Os06g0695900 | RAE3, OsRAE3 | Detail |
| CX6g042730 | 6:25,636,958-25,638,189 | + | C1H6g11584 | C2H6g13578 | LOC_Os06g48160 | Os06g0696400 | - | Detail |
| CX6g042120 | 6:25,641,195-25,643,562 | + | C1H6g12447 | C2H6g05532 | LOC_Os06g48170 | Os06g0696566 | - | Detail |
| CX6g041933 | 6:25,650,029-25,651,476 | + | C1H6g10337 | C2H6g10857 | LOC_Os06g48200 | Os06g0696600 | - | Detail |
| CX6g043275 | 6:25,670,082-25,671,151 | - | C1H6g16540 | C2H6g22123 | LOC_Os06g48200 | Os06g0697000 | - | Detail |
| CX6g043639 | 6:25,677,225-25,679,940 | + | C1H6g01111 | C2H6g13910 | LOC_Os06g48210 | Os06g0697200 | - | Detail |