| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23186 | 1:27,269,220-27,271,527 | + | C1H1g25026 | CX1g000184 | LOC_Os01g53240 | Os01g0733500 | - | Detail |
| C2H1g16933 | 1:27,272,531-27,277,968 | - | C1H1g17481 | CX1g001304 | LOC_Os01g53250 | Os01g0733600 | - | Detail |
| C2H1g28398 | 1:27,285,980-27,289,362 | + | C1H1g18098 | CX1g001858 | LOC_Os01g53260 | Os01g0734000 | OsWRKY23 | Detail |
| C2H1g03923 | 1:27,293,250-27,293,800 | + | C1H1g05786 | CX1g006620 | LOC_Os01g53280 | Os01g0734100 | - | Detail |
| C2H1g19534 | 1:27,304,010-27,311,886 | + | C1H1g09802 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C2H1g09241 | 1:27,326,536-27,327,972 | + | C1H1g16727 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C2H1g27577 | 1:27,338,608-27,340,083 | + | C1H1g17596 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C2H1g28000 | 1:27,363,984-27,365,414 | - | C1H1g12410 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C2H1g20968 | 1:27,364,009-27,365,288 | + | - | - | - | Os01g0735450 | - | Detail |
| C2H1g21886 | 1:27,365,328-27,367,380 | + | - | - | - | - | - | Detail |
| C2H1g03039 | 1:27,370,524-27,371,948 | - | C1H1g11199 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C2H1g19693 | 1:27,379,721-27,381,136 | - | C1H1g10989 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C2H1g23129 | 1:27,381,416-27,384,963 | + | C1H1g04228 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C2H1g09664 | 1:27,386,344-27,387,096 | + | C1H1g11257 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C2H1g22559 | 1:27,401,377-27,403,368 | + | C1H1g18188 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C2H1g29848 | 1:27,411,208-27,418,789 | + | C1H1g17501 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C2H1g21171 | 1:27,420,379-27,421,816 | + | C1H1g26053 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C2H1g23141 | 1:27,421,843-27,422,460 | + | C1H1g26053 | CX1g007234 | - | Os01g0221600 | OsALMT4 | Detail |
| C2H1g28481 | 1:27,428,371-27,429,000 | + | C1H1g28789 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C2H1g06822 | 1:27,430,737-27,435,013 | - | C1H1g20246 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045936 | 6:25,540,435-25,542,381 | + | C1H6g19207 | C2H6g00488 | LOC_Os06g47920 | Os06g0694300 | - | Detail |
| CX6g045378 | 6:25,543,112-25,544,489 | - | C1H6g15840 | C2H6g21559 | LOC_Os06g47930 | Os06g0694400 | - | Detail |
| CX6g042018 | 6:25,548,477-25,549,434 | + | C1H6g14631 | C2H6g20159 | LOC_Os06g47940 | Os06g0694500 | - | Detail |
| CX6g044084 | 6:25,550,041-25,551,495 | - | C1H6g11152 | C2H6g21873 | LOC_Os06g47950 | Os06g0694600 | - | Detail |
| CX6g043107 | 6:25,552,297-25,552,900 | + | - | - | - | - | - | Detail |
| CX6g041709 | 6:25,555,147-25,556,209 | - | C1H6g16129 | C2H6g17824 | LOC_Os06g47970 | Os06g0694800 | - | Detail |
| CX6g042590 | 6:25,559,279-25,560,743 | + | C1H6g24635 | C2H6g04786 | LOC_Os06g48000 | Os06g0695200 | - | Detail |
| CX6g045449 | 6:25,566,106-25,568,464 | - | C1H6g27295 | C2H6g23077 | LOC_Os06g48010 | Os06g0695300 | - | Detail |
| CX6g045003 | 6:25,577,959-25,580,372 | + | C1H6g22856 | C2H6g04958 | LOC_Os06g48020 | Os06g0695400 | - | Detail |
| CX6g043360 | 6:25,589,467-25,590,088 | - | C1H6g06805 | - | - | - | - | Detail |
| CX6g043601 | 6:25,597,624-25,602,656 | + | C1H6g17302 | C2H6g12694 | LOC_Os06g48030 | Os06g0695500 | - | Detail |
| CX6g045698 | 6:25,607,830-25,610,238 | - | C1H6g13893 | C2H6g26512 | LOC_Os06g48040 | Os06g0695600 | OsMAR1 | Detail |
| CX6g041666 | 6:25,618,161-25,619,537 | + | C1H6g14725 | - | LOC_Os06g48050 | Os06g0695700 | - | Detail |
| CX6g043064 | 6:25,620,523-25,624,050 | - | C1H6g20833 | C2H6g12199 | LOC_Os06g48060 | Os06g0695800 | STAR1, OsENA2, OsABCI12 | Detail |
| CX6g041940 | 6:25,627,307-25,628,491 | - | C1H6g23654 | C2H6g02871 | LOC_Os06g48065 | Os06g0695900 | RAE3, OsRAE3 | Detail |
| CX6g042730 | 6:25,636,958-25,638,189 | + | C1H6g11584 | C2H6g13578 | LOC_Os06g48160 | Os06g0696400 | - | Detail |
| CX6g042120 | 6:25,641,195-25,643,562 | + | C1H6g12447 | C2H6g05532 | LOC_Os06g48170 | Os06g0696566 | - | Detail |
| CX6g041933 | 6:25,650,029-25,651,476 | + | C1H6g10337 | C2H6g10857 | LOC_Os06g48200 | Os06g0696600 | - | Detail |
| CX6g043275 | 6:25,670,082-25,671,151 | - | C1H6g16540 | C2H6g22123 | LOC_Os06g48200 | Os06g0697000 | - | Detail |
| CX6g043639 | 6:25,677,225-25,679,940 | + | C1H6g01111 | C2H6g13910 | LOC_Os06g48210 | Os06g0697200 | - | Detail |