| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g06554 | 1:1,267,481-1,270,261 | - | C1H1g14698 | CX1g000136 | LOC_Os01g03640 | Os01g0127200 | OsLPR5, OsSTA2 | Detail |
| C2H1g21958 | 1:1,273,959-1,277,999 | - | C1H1g30854 | CX1g005762 | LOC_Os01g03650 | Os01g0127300 | - | Detail |
| C2H1g24576 | 1:1,278,156-1,280,615 | + | C1H1g00412 | CX1g003465 | LOC_Os01g03660 | Os01g0127400 | - | Detail |
| C2H1g17865 | 1:1,282,083-1,282,775 | + | C1H1g25838 | CX1g002042 | LOC_Os01g19970 | Os01g0127450 | - | Detail |
| C2H1g02319 | 1:1,283,305-1,284,401 | + | C1H1g17663 | CX1g005179 | LOC_Os01g03670 | Os01g0127500 | OsTKPR2 | Detail |
| C2H1g19770 | 1:1,285,305-1,285,871 | + | C1H1g11231 | CX1g002886 | LOC_Os01g03680 | Os01g0127600 | - | Detail |
| C2H1g03781 | 1:1,288,272-1,291,329 | + | C1H1g05668 | CX1g006285 | LOC_Os01g03690 | Os01g0127700 | - | Detail |
| C2H1g13836 | 1:1,297,101-1,302,164 | + | C1H1g08835 | CX1g004218 | LOC_Os01g03710 | Os01g0127900 | - | Detail |
| C2H1g25959 | 1:1,312,131-1,313,344 | - | C1H1g25654 | CX1g002896 | LOC_Os01g03720 | Os01g0128000 | MYB1, Os2R_MYB1 | Detail |
| C2H1g01385 | 1:1,324,388-1,326,037 | - | C1H1g31764 | CX1g004405 | LOC_Os01g03740 | Os01g0128100 | - | Detail |
| C2H1g18960 | 1:1,326,807-1,329,714 | + | C1H1g04042 | CX1g004550 | LOC_Os01g03730 | Os01g0128200 | - | Detail |
| C2H1g15883 | 1:1,329,952-1,330,824 | - | C1H1g30874 | CX1g002239 | LOC_Os01g03750 | Os01g0128300 | MHZ4 | Detail |
| C2H1g19347 | 1:1,331,825-1,337,142 | - | C1H1g07436 | CX1g006333 | LOC_Os01g03760 | Os01g0128400 | - | Detail |
| C2H1g18545 | 1:1,345,364-1,353,485 | + | C1H1g20521 | CX1g003056 | LOC_Os01g03820 | Os01g0128800 | - | Detail |
| C2H1g10390 | 1:1,366,798-1,368,202 | + | C1H1g27481 | CX1g002103 | LOC_Os01g03840 | Os01g0129200 | SL1, sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB | Detail |
| C2H1g17049 | 1:1,379,470-1,382,437 | - | C1H1g30507 | CX1g003490 | LOC_Os01g03870 | Os01g0129500 | - | Detail |
| C2H1g13371 | 1:1,395,250-1,396,259 | + | C1H1g11492 | CX1g006241 | LOC_Os01g03890 | Os01g0129600 | - | Detail |
| C2H1g20654 | 1:1,408,458-1,408,763 | - | - | CX1g003157 | LOC_Os01g03900 | Os01g0129800 | - | Detail |
| C2H1g29639 | 1:1,411,780-1,414,851 | - | C1H1g30416 | CX1g005809 | LOC_Os01g03914 | Os01g0130000 | - | Detail |
| C2H1g19941 | 1:1,416,854-1,417,432 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045936 | 6:25,540,435-25,542,381 | + | C1H6g19207 | C2H6g00488 | LOC_Os06g47920 | Os06g0694300 | - | Detail |
| CX6g045378 | 6:25,543,112-25,544,489 | - | C1H6g15840 | C2H6g21559 | LOC_Os06g47930 | Os06g0694400 | - | Detail |
| CX6g042018 | 6:25,548,477-25,549,434 | + | C1H6g14631 | C2H6g20159 | LOC_Os06g47940 | Os06g0694500 | - | Detail |
| CX6g044084 | 6:25,550,041-25,551,495 | - | C1H6g11152 | C2H6g21873 | LOC_Os06g47950 | Os06g0694600 | - | Detail |
| CX6g043107 | 6:25,552,297-25,552,900 | + | - | - | - | - | - | Detail |
| CX6g041709 | 6:25,555,147-25,556,209 | - | C1H6g16129 | C2H6g17824 | LOC_Os06g47970 | Os06g0694800 | - | Detail |
| CX6g042590 | 6:25,559,279-25,560,743 | + | C1H6g24635 | C2H6g04786 | LOC_Os06g48000 | Os06g0695200 | - | Detail |
| CX6g045449 | 6:25,566,106-25,568,464 | - | C1H6g27295 | C2H6g23077 | LOC_Os06g48010 | Os06g0695300 | - | Detail |
| CX6g045003 | 6:25,577,959-25,580,372 | + | C1H6g22856 | C2H6g04958 | LOC_Os06g48020 | Os06g0695400 | - | Detail |
| CX6g043360 | 6:25,589,467-25,590,088 | - | C1H6g06805 | - | - | - | - | Detail |
| CX6g043601 | 6:25,597,624-25,602,656 | + | C1H6g17302 | C2H6g12694 | LOC_Os06g48030 | Os06g0695500 | - | Detail |
| CX6g045698 | 6:25,607,830-25,610,238 | - | C1H6g13893 | C2H6g26512 | LOC_Os06g48040 | Os06g0695600 | OsMAR1 | Detail |
| CX6g041666 | 6:25,618,161-25,619,537 | + | C1H6g14725 | - | LOC_Os06g48050 | Os06g0695700 | - | Detail |
| CX6g043064 | 6:25,620,523-25,624,050 | - | C1H6g20833 | C2H6g12199 | LOC_Os06g48060 | Os06g0695800 | STAR1, OsENA2, OsABCI12 | Detail |
| CX6g041940 | 6:25,627,307-25,628,491 | - | C1H6g23654 | C2H6g02871 | LOC_Os06g48065 | Os06g0695900 | RAE3, OsRAE3 | Detail |
| CX6g042730 | 6:25,636,958-25,638,189 | + | C1H6g11584 | C2H6g13578 | LOC_Os06g48160 | Os06g0696400 | - | Detail |
| CX6g042120 | 6:25,641,195-25,643,562 | + | C1H6g12447 | C2H6g05532 | LOC_Os06g48170 | Os06g0696566 | - | Detail |
| CX6g041933 | 6:25,650,029-25,651,476 | + | C1H6g10337 | C2H6g10857 | LOC_Os06g48200 | Os06g0696600 | - | Detail |
| CX6g043275 | 6:25,670,082-25,671,151 | - | C1H6g16540 | C2H6g22123 | LOC_Os06g48200 | Os06g0697000 | - | Detail |
| CX6g043639 | 6:25,677,225-25,679,940 | + | C1H6g01111 | C2H6g13910 | LOC_Os06g48210 | Os06g0697200 | - | Detail |