| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15273 | 5:3,831,454-3,832,605 | - | C2H5g24682 | CX5g040319 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |
| C1H5g24081 | 5:3,834,404-3,835,475 | - | C2H5g23593 | CX5g038579 | LOC_Os05g08550 | - | - | Detail |
| C1H5g18416 | 5:3,836,538-3,838,831 | - | C2H5g22086 | - | - | Os05g0178300 | - | Detail |
| C1H5g28500 | 5:3,840,108-3,843,426 | - | C2H5g19576 | CX5g037936 | LOC_Os05g08560 | Os05g0178400 | - | Detail |
| C1H5g30909 | 5:3,849,015-3,851,278 | - | C2H5g23931 | CX5g039091 | LOC_Os05g08570 | Os05g0178600 | - | Detail |
| C1H5g11220 | 5:3,851,313-3,851,564 | - | C2H5g20930 | CX5g038646 | - | Os05g0178600 | - | Detail |
| C1H5g28275 | 5:3,874,896-3,878,806 | + | C2H5g20358 | CX5g038400 | LOC_Os05g08600 | Os05g0178900 | - | Detail |
| C1H5g03795 | 5:3,881,317-3,885,675 | + | C2H5g18108 | CX5g039771 | LOC_Os05g08610 | Os05g0179000 | - | Detail |
| C1H5g15516 | 5:3,896,992-3,897,444 | + | C2H5g28488 | - | LOC_Os08g23900 | - | - | Detail |
| C1H5g19959 | 5:3,919,187-3,921,168 | - | C2H5g17102 | CX5g037983 | LOC_Os05g08640 | Os05g0179300 | - | Detail |
| C1H5g21520 | 5:3,945,129-3,948,203 | + | C2H5g23753 | CX5g039721 | LOC_Os05g08730 | Os05g0179800 | - | Detail |
| C1H5g27830 | 5:3,989,851-3,993,349 | - | C2H5g25802 | CX5g038350 | LOC_Os05g08790 | Os05g0180400 | - | Detail |
| C1H5g02747 | 5:3,994,282-3,997,197 | - | C2H5g06685 | CX5g037875 | LOC_Os05g08800 | Os05g0180500 | - | Detail |
| C1H5g20076 | 5:4,011,392-4,022,845 | - | C2H5g05984 | CX5g036876 | LOC_Os05g08810 | Os05g0180600 | - | Detail |
| C1H5g03323 | 5:4,025,285-4,026,384 | + | C2H5g03050 | CX5g037205 | LOC_Os05g08820 | Os05g0180700 | - | Detail |
| C1H5g21276 | 5:4,036,621-4,042,595 | + | C2H5g11956 | CX5g037851 | LOC_Os05g08840 | Os05g0181000 | - | Detail |
| C1H5g29149 | 5:4,046,721-4,047,724 | - | C2H5g06572 | CX5g037202 | LOC_Os05g08854 | Os05g0181250 | - | Detail |
| C1H5g20825 | 5:4,075,430-4,079,590 | - | C2H5g07455 | CX10g010048 | - | - | - | Detail |
| C1H5g24930 | 5:4,088,887-4,091,504 | - | C2H5g23526 | CX5g038397 | LOC_Os05g08930 | Os05g0182100 | - | Detail |
| C1H5g10054 | 5:4,093,343-4,097,173 | - | C2H5g19515 | CX5g038109 | LOC_Os05g08950 | Os05g0182201 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045936 | 6:25,540,435-25,542,381 | + | C1H6g19207 | C2H6g00488 | LOC_Os06g47920 | Os06g0694300 | - | Detail |
| CX6g045378 | 6:25,543,112-25,544,489 | - | C1H6g15840 | C2H6g21559 | LOC_Os06g47930 | Os06g0694400 | - | Detail |
| CX6g042018 | 6:25,548,477-25,549,434 | + | C1H6g14631 | C2H6g20159 | LOC_Os06g47940 | Os06g0694500 | - | Detail |
| CX6g044084 | 6:25,550,041-25,551,495 | - | C1H6g11152 | C2H6g21873 | LOC_Os06g47950 | Os06g0694600 | - | Detail |
| CX6g043107 | 6:25,552,297-25,552,900 | + | - | - | - | - | - | Detail |
| CX6g041709 | 6:25,555,147-25,556,209 | - | C1H6g16129 | C2H6g17824 | LOC_Os06g47970 | Os06g0694800 | - | Detail |
| CX6g042590 | 6:25,559,279-25,560,743 | + | C1H6g24635 | C2H6g04786 | LOC_Os06g48000 | Os06g0695200 | - | Detail |
| CX6g045449 | 6:25,566,106-25,568,464 | - | C1H6g27295 | C2H6g23077 | LOC_Os06g48010 | Os06g0695300 | - | Detail |
| CX6g045003 | 6:25,577,959-25,580,372 | + | C1H6g22856 | C2H6g04958 | LOC_Os06g48020 | Os06g0695400 | - | Detail |
| CX6g043360 | 6:25,589,467-25,590,088 | - | C1H6g06805 | - | - | - | - | Detail |
| CX6g043601 | 6:25,597,624-25,602,656 | + | C1H6g17302 | C2H6g12694 | LOC_Os06g48030 | Os06g0695500 | - | Detail |
| CX6g045698 | 6:25,607,830-25,610,238 | - | C1H6g13893 | C2H6g26512 | LOC_Os06g48040 | Os06g0695600 | OsMAR1 | Detail |
| CX6g041666 | 6:25,618,161-25,619,537 | + | C1H6g14725 | - | LOC_Os06g48050 | Os06g0695700 | - | Detail |
| CX6g043064 | 6:25,620,523-25,624,050 | - | C1H6g20833 | C2H6g12199 | LOC_Os06g48060 | Os06g0695800 | STAR1, OsENA2, OsABCI12 | Detail |
| CX6g041940 | 6:25,627,307-25,628,491 | - | C1H6g23654 | C2H6g02871 | LOC_Os06g48065 | Os06g0695900 | RAE3, OsRAE3 | Detail |
| CX6g042730 | 6:25,636,958-25,638,189 | + | C1H6g11584 | C2H6g13578 | LOC_Os06g48160 | Os06g0696400 | - | Detail |
| CX6g042120 | 6:25,641,195-25,643,562 | + | C1H6g12447 | C2H6g05532 | LOC_Os06g48170 | Os06g0696566 | - | Detail |
| CX6g041933 | 6:25,650,029-25,651,476 | + | C1H6g10337 | C2H6g10857 | LOC_Os06g48200 | Os06g0696600 | - | Detail |
| CX6g043275 | 6:25,670,082-25,671,151 | - | C1H6g16540 | C2H6g22123 | LOC_Os06g48200 | Os06g0697000 | - | Detail |
| CX6g043639 | 6:25,677,225-25,679,940 | + | C1H6g01111 | C2H6g13910 | LOC_Os06g48210 | Os06g0697200 | - | Detail |