| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g11863 | 1:1,707,965-1,710,032 | - | C2H1g03427 | CX1g005618 | LOC_Os01g04600 | Os01g0138600 | - | Detail |
| C1H1g20656 | 1:1,716,127-1,717,616 | + | C2H1g25783 | CX1g001796 | - | Os01g0138800 | - | Detail |
| C1H1g06342 | 1:1,719,156-1,722,264 | - | C2H1g07061 | CX1g006542 | LOC_Os01g04630 | Os01g0138900 | - | Detail |
| C1H1g11652 | 1:1,724,467-1,725,913 | + | C2H1g27844 | CX1g003275 | LOC_Os01g04640 | Os01g0139000 | - | Detail |
| C1H1g00241 | 1:1,729,234-1,732,064 | - | C2H1g05789 | CX1g001840 | LOC_Os01g04650 | Os01g0139200 | - | Detail |
| C1H1g05122 | 1:1,741,117-1,743,583 | + | C2H1g17112 | CX1g002711 | LOC_Os01g04660 | Os01g0139600 | - | Detail |
| C1H1g03275 | 1:1,747,333-1,747,644 | - | C2H1g10438 | CX1g005592 | LOC_Os01g04670 | Os01g0139700 | - | Detail |
| C1H1g00558 | 1:1,753,822-1,754,082 | - | C2H1g06897 | CX1g006410 | LOC_Os01g04690 | Os01g0139900 | - | Detail |
| C1H1g31447 | 1:1,774,401-1,780,572 | + | C2H1g22483 | CX1g006468 | LOC_Os01g04720 | Os01g0140400 | - | Detail |
| C1H1g09982 | 1:1,836,864-1,843,525 | - | C2H1g12872 | CX1g002238 | LOC_Os01g04814 | Os01g0141300 | - | Detail |
| C1H1g01035 | 1:1,849,320-1,852,448 | - | C2H1g10361 | CX1g004748 | LOC_Os01g04840 | Os01g0141300 | - | Detail |
| C1H1g10013 | 1:1,857,792-1,862,356 | + | C2H1g30366 | CX1g006709 | LOC_Os01g04860 | Os01g0141600 | - | Detail |
| C1H1g07767 | 1:1,862,795-1,867,053 | - | C2H1g30003 | CX1g005046 | LOC_Os01g04870 | Os01g0141700 | OsUV-DDB2 | Detail |
| C1H1g20192 | 1:1,870,016-1,874,599 | + | C2H1g13473 | CX1g003408 | LOC_Os01g04880 | Os01g0141900 | - | Detail |
| C1H1g08627 | 1:1,874,751-1,879,507 | - | C2H1g10525 | CX1g004217 | LOC_Os01g04900 | Os01g0142100 | - | Detail |
| C1H1g24636 | 1:1,879,702-1,881,712 | + | C2H1g29642 | CX1g004602 | LOC_Os01g04910 | Os01g0142200 | - | Detail |
| C1H1g21356 | 1:1,883,914-1,887,167 | + | C2H1g02460 | CX1g005334 | LOC_Os01g04920 | Os01g0142300 | SQD2.2, OsSQD2.2 | Detail |
| C1H1g15125 | 1:1,890,503-1,893,523 | - | C2H1g07926 | CX1g001148 | LOC_Os01g04930 | Os01g0142500 | Os2R_MYB2 | Detail |
| C1H1g12761 | 1:1,904,170-1,907,951 | + | C2H1g24212 | CX1g007203 | LOC_Os01g04950 | Os01g0142800 | - | Detail |
| C1H1g11278 | 1:1,926,993-1,927,363 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045285 | 6:25,165,551-25,169,378 | - | C1H6g27517 | C2H6g20702 | LOC_Os06g47294 | Os06g0687450 | - | Detail |
| CX6g041285 | 6:25,171,085-25,175,669 | + | C1H6g00586 | C2H6g29325 | LOC_Os06g47300 | Os06g0687500 | - | Detail |
| CX6g042264 | 6:25,180,392-25,181,490 | + | C1H6g22446 | C2H6g00459 | LOC_Os06g47310 | Os06g0687600 | - | Detail |
| CX6g044832 | 6:25,183,576-25,188,341 | - | C1H6g04180 | C2H6g20319 | LOC_Os06g47320 | Os06g0687700 | - | Detail |
| CX6g045256 | 6:25,190,275-25,194,759 | + | C1H6g10591 | C2H6g13915 | LOC_Os06g47330 | Os06g0687800 | - | Detail |
| CX6g045563 | 6:25,196,621-25,199,661 | + | C1H6g18505 | C2H6g24879 | LOC_Os06g47340 | Os06g0687900 | OsIRX14, OsGT43J, OsGT43J/OsIRX14 | Detail |
| CX6g044139 | 6:25,201,318-25,207,564 | + | C1H6g04786 | C2H6g23849 | LOC_Os06g47350 | Os06g0688100 | - | Detail |
| CX6g042228 | 6:25,209,214-25,209,510 | - | C1H6g31053 | C2H6g01192 | LOC_Os06g47360 | Os06g0688200 | - | Detail |
| CX6g042243 | 6:25,222,247-25,222,648 | - | - | - | - | - | - | Detail |
| CX6g041739 | 6:25,232,740-25,233,291 | - | C1H6g31053 | C2H6g29128 | LOC_Os06g47390 | Os06g0688200 | - | Detail |
| CX6g044230 | 6:25,238,600-25,239,709 | - | C1H6g29639 | - | LOC_Os06g47400 | Os06g0688400 | - | Detail |
| CX6g043115 | 6:25,263,557-25,263,739 | + | - | - | LOC_Os10g10798 | Os10g0187366 | - | Detail |
| CX6g044647 | 6:25,269,248-25,269,490 | + | C1H4g06341 | C2H2g20826 | - | - | - | Detail |
| CX6g045769 | 6:25,271,872-25,273,104 | + | C1H6g29639 | - | LOC_Os06g47400 | Os06g0688400 | - | Detail |
| CX6g042739 | 6:25,273,674-25,279,880 | - | C1H6g06587 | C2H6g10086 | LOC_Os06g47470 | Os06g0689600 | OsRLCK214 | Detail |
| CX6g045171 | 6:25,281,782-25,282,258 | + | C1H6g03265 | - | LOC_Os06g47480 | Os06g0689700 | - | Detail |
| CX6g044370 | 6:25,284,564-25,286,151 | - | C1H6g14379 | C2H6g00925 | LOC_Os06g47400 | Os06g0688400 | - | Detail |
| CX6g044728 | 6:25,288,216-25,288,365 | + | - | - | - | - | - | Detail |
| CX6g043799 | 6:25,288,761-25,297,583 | - | C1H6g27899 | C2H6g09447 | LOC_Os06g47550 | Os06g0690700 | - | Detail |
| CX6g042475 | 6:25,300,892-25,303,867 | + | C1H6g30591 | C2H6g06929 | LOC_Os06g47570 | Os06g0690900 | - | Detail |