| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09624 | 1:30,787,077-30,788,245 | - | C1H1g00772 | CX1g005248 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| C2H1g09286 | 1:30,799,473-30,816,246 | - | C1H1g15712 | CX1g002744 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| C2H1g26961 | 1:30,828,310-30,834,847 | - | C1H1g15897 | CX1g002744 | LOC_Os01g60050 | Os01g0816500 | - | Detail |
| C2H1g04146 | 1:30,837,506-30,842,632 | + | C1H1g04794 | CX1g001742 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| C2H1g13967 | 1:30,844,373-30,844,582 | + | C1H1g04794 | CX1g001742 | LOC_Os01g60070 | Os01g0816600 | - | Detail |
| C2H1g24791 | 1:30,845,806-30,847,272 | + | C1H1g24642 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C2H1g25178 | 1:30,847,362-30,847,664 | + | C1H1g24879 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C2H1g12383 | 1:30,852,593-30,855,794 | - | C1H1g23182 | CX1g001408 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| C2H1g27536 | 1:30,858,990-30,862,426 | - | C1H1g20937 | CX1g001908 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| C2H1g05301 | 1:30,867,420-30,870,525 | + | C1H1g16273 | CX1g005873 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| C2H1g04044 | 1:30,871,690-30,872,622 | - | C1H1g15906 | CX1g004355 | - | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C2H1g17170 | 1:30,884,562-30,888,327 | + | C1H1g14583 | CX1g000357 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| C2H1g22450 | 1:30,888,779-30,892,097 | - | C1H1g28961 | CX1g003723 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| C2H1g03576 | 1:30,903,588-30,907,758 | + | C1H1g28985 | CX1g005948 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| C2H1g16399 | 1:30,911,405-30,912,871 | + | C1H1g10378 | CX1g005236 | - | Os01g0818100 | - | Detail |
| C2H1g17192 | 1:30,922,297-30,925,172 | + | C1H1g09654 | CX1g002636 | LOC_Os01g60260 | Os01g0818300 | - | Detail |
| C2H1g08644 | 1:30,931,215-30,934,712 | + | C1H1g30151 | CX1g003042 | LOC_Os01g60270 | Os01g0818400 | - | Detail |
| C2H1g07956 | 1:30,936,955-30,947,811 | - | C1H1g03453 | CX1g000179 | LOC_Os01g60280 | Os01g0818700 | - | Detail |
| C2H1g13182 | 1:30,953,125-30,956,828 | - | - | - | LOC_Os01g60290 | Os01g0818900 | - | Detail |
| C2H1g24195 | 1:30,956,541-30,960,942 | + | C1H1g23393 | CX1g001508 | LOC_Os01g60309 | Os01g0819000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g045624 | 6:24,843,748-24,847,412 | + | C1H6g00472 | - | - | - | - | Detail |
| CX6g042010 | 6:24,848,798-24,849,040 | - | - | - | - | - | - | Detail |
| CX6g041534 | 6:24,891,069-24,896,242 | + | C1H6g04695 | C2H6g06369 | LOC_Os06g46670 | Os06g0680500 | OsGLR6.12 | Detail |
| CX6g045818 | 6:24,901,746-24,904,957 | + | C1H6g24034 | C2H6g07546 | LOC_Os06g46680 | Os06g0680700 | - | Detail |
| CX6g045036 | 6:24,910,283-24,914,088 | - | C1H6g15452 | C2H6g27209 | LOC_Os06g46690 | - | - | Detail |
| CX6g042679 | 6:24,914,366-24,918,570 | - | C1H6g22683 | C2H6g05863 | LOC_Os06g46700 | Os06g0680900 | - | Detail |
| CX6g044098 | 6:24,919,396-24,925,391 | - | C1H6g09232 | C2H6g06846 | LOC_Os06g46730 | Os06g0681100 | - | Detail |
| CX6g041719 | 6:24,928,046-24,929,003 | - | C1H6g21904 | C2H6g04311 | LOC_Os06g46740 | Os06g0681200 | - | Detail |
| CX6g042992 | 6:24,930,141-24,931,725 | - | C1H6g27620 | C2H6g15200 | LOC_Os06g46754 | - | - | Detail |
| CX6g041765 | 6:24,933,945-24,934,184 | - | - | C2H6g19032 | LOC_Os06g49410 | Os06g0681300 | - | Detail |
| CX6g043457 | 6:24,952,735-24,956,837 | + | C1H6g15209 | C2H6g16018 | LOC_Os06g46799 | Os06g0681600 | - | Detail |
| CX6g043574 | 6:24,960,036-24,961,666 | + | C1H6g22995 | C2H6g08654 | LOC_Os06g46820 | Os06g0681700 | - | Detail |
| CX6g042797 | 6:24,982,768-24,982,920 | + | - | - | - | Os01g0564400 | - | Detail |
| CX6g044446 | 6:24,983,827-24,984,015 | - | - | - | - | - | - | Detail |
| CX6g041690 | 6:24,988,433-24,991,811 | - | C1H6g31029 | C2H6g15213 | LOC_Os06g46880 | Os06g0682700 | - | Detail |
| CX6g045165 | 6:24,994,108-24,998,538 | - | C1H6g15201 | C2H6g18919 | LOC_Os06g46890 | Os06g0682800 | - | Detail |
| CX6g041604 | 6:24,999,279-25,001,323 | - | C1H6g24839 | C2H6g19100 | LOC_Os06g46900 | Os06g0682900 | HSA32, Hsa32, OsPPS1 | Detail |
| CX6g045157 | 6:25,003,490-25,005,142 | + | C1H6g31099 | C2H6g06650 | LOC_Os06g46910 | Os06g0683000 | - | Detail |
| CX6g045267 | 6:25,006,066-25,007,751 | - | C1H6g16821 | C2H6g29818 | LOC_Os06g46920 | Os06g0683100 | - | Detail |
| CX6g043556 | 6:25,008,548-25,010,552 | - | C1H6g05096 | C2H6g17421 | LOC_Os06g46930 | Os06g0683200 | - | Detail |