| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g18962 | 5:12,540,821-12,542,672 | - | C1H5g00809 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C2H5g16379 | 5:12,560,833-12,561,348 | + | C1H5g07771 | CX5g040926 | LOC_Os05g25600 | - | - | Detail |
| C2H5g17208 | 5:12,564,172-12,565,033 | + | C1H5g18434 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C2H5g12884 | 5:12,571,540-12,575,563 | - | C1H5g29408 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C2H5g23272 | 5:12,622,131-12,622,888 | + | C1H5g31853 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C2H5g30247 | 5:12,623,482-12,626,593 | + | C1H5g21190 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C2H5g20457 | 5:12,642,054-12,643,214 | + | C1H5g09562 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C2H5g00966 | 5:12,649,272-12,652,168 | + | C1H5g20684 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C2H5g05199 | 5:12,658,867-12,659,098 | - | - | CX5g040463 | - | - | - | Detail |
| C2H5g12832 | 5:12,659,126-12,659,341 | - | C1H5g15138 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C2H5g27944 | 5:12,666,481-12,670,358 | + | C1H5g03510 | - | - | - | - | Detail |
| C2H5g23193 | 5:12,666,616-12,670,222 | - | C1H5g02171 | CX5g037938 | LOC_Os05g25320 | Os05g0475600 | - | Detail |
| C2H5g25840 | 5:12,682,852-12,686,503 | + | C1H5g07569 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C2H5g02562 | 5:12,687,807-12,692,024 | + | C1H5g09336 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C2H5g29319 | 5:12,693,761-12,695,203 | + | C1H5g18365 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g21674 | 5:12,722,634-12,724,518 | + | C1H5g16408 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C2H5g11879 | 5:12,724,950-12,726,343 | + | C1H5g24963 | CX5g039314 | LOC_Os05g25170 | - | - | Detail |
| C2H5g22294 | 5:12,730,462-12,732,138 | + | C1H5g19700 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g05113 | 5:12,732,485-12,735,940 | - | C1H5g26142 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C2H5g27623 | 5:12,768,072-12,770,998 | - | C1H5g16305 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006665 | 1:25,745,690-25,748,364 | - | C1H1g31100 | C2H1g21453 | LOC_Os01g50259 | Os01g0697400 | - | Detail |
| CX1g003651 | 1:25,759,507-25,760,535 | - | - | - | LOC_Os01g50310 | Os01g0698000 | - | Detail |
| CX1g002929 | 1:25,762,264-25,762,754 | - | - | C2H8g28836 | - | - | - | Detail |
| CX1g002329 | 1:25,763,707-25,768,961 | + | C1H1g00835 | C2H1g28295 | LOC_Os01g50320 | Os01g0698100 | - | Detail |
| CX1g004672 | 1:25,769,419-25,770,438 | - | - | - | LOC_Os01g50330 | Os01g0698200 | - | Detail |
| CX1g000760 | 1:25,771,967-25,774,141 | + | C1H1g04459 | C2H1g16612 | LOC_Os01g50340 | Os01g0698300 | - | Detail |
| CX1g006494 | 1:25,789,481-25,790,095 | + | C1H1g03032 | C2H1g02009 | - | - | - | Detail |
| CX1g000817 | 1:25,792,043-25,792,679 | - | - | - | LOC_Os01g50350 | Os01g0698800 | - | Detail |
| CX1g005385 | 1:25,803,658-25,807,618 | + | C1H1g20270 | C2H1g21203 | LOC_Os01g50370 | Os01g0699100 | OsMAPKKK63 | Detail |
| CX1g005831 | 1:25,813,987-25,815,234 | + | C1H1g20270 | C2H1g21203 | LOC_Os01g50400 | Os01g0699400 | - | Detail |
| CX1g006267 | 1:25,817,734-25,821,042 | - | C1H1g31868 | C2H1g26478 | LOC_Os01g50410 | Os01g0699500 | OsMKKK70 | Detail |
| CX1g004661 | 1:25,825,991-25,827,750 | - | C1H1g30510 | C2H1g04109 | LOC_Os01g50420 | Os01g0699600 | MKKK62 | Detail |
| CX1g001816 | 1:25,834,943-25,835,789 | + | C1H1g24072 | C2H1g24593 | LOC_Os01g50440 | Os01g0699900 | - | Detail |
| CX1g001717 | 1:25,847,757-25,848,953 | + | C1H1g23581 | C2H1g02985 | LOC_Os01g50450 | Os01g0700000 | - | Detail |
| CX1g003134 | 1:25,852,826-25,854,144 | + | C1H1g27989 | C2H1g06417 | LOC_Os01g50460 | Os01g0700100 | - | Detail |
| CX1g003322 | 1:25,856,078-25,860,614 | + | C1H1g17202 | C2H1g25689 | LOC_Os01g50470 | Os01g0700200 | - | Detail |
| CX1g002074 | 1:25,861,906-25,863,395 | - | C1H1g19643 | C2H1g26664 | LOC_Os01g50480 | Os01g0701700 | - | Detail |
| CX1g003729 | 1:25,871,982-25,873,605 | + | C1H1g22663 | C2H1g16684 | LOC_Os01g50490 | Os01g0700500 | - | Detail |
| CX1g006346 | 1:25,899,497-25,899,919 | - | - | - | - | - | - | Detail |
| CX1g003918 | 1:25,915,546-25,919,039 | + | C1H1g16347 | C2H1g26426 | LOC_Os01g50590 | Os01g0701500 | Os1500, CYP711A4 | Detail |