| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g26347 | 12:1,987,107-1,987,328 | + | C2H11g12348 | CX12g016356 | LOC_Os12g04924 | Os12g0143100 | - | Detail |
| C1H12g23605 | 12:1,987,383-1,992,947 | + | C2H12g17505 | CX12g015488 | LOC_Os12g04930 | Os12g0143200 | OsASHL1 | Detail |
| C1H12g20952 | 12:1,995,364-1,995,699 | - | C2H12g04572 | CX12g018267 | LOC_Os12g04934 | Os12g0143300 | - | Detail |
| C1H12g29028 | 12:1,997,289-2,001,884 | - | C2H12g15233 | CX12g016016 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| C1H12g04669 | 12:2,003,442-2,006,621 | - | C2H12g15233 | CX11g014000 | LOC_Os12g04940 | Os12g0143400 | - | Detail |
| C1H12g22085 | 12:2,008,410-2,008,969 | - | C2H12g29588 | - | - | - | - | Detail |
| C1H12g20218 | 12:2,021,107-2,024,830 | - | C2H12g30125 | CX12g015864 | LOC_Os12g04980 | Os12g0143800 | DMC1A, OsDMC1A, OsDmc1A, Dmc1A, DMC1, OsDMC1, RiLIM15A | Detail |
| C1H12g18494 | 12:2,026,187-2,033,815 | + | C2H12g21227 | CX12g016038 | LOC_Os12g04990 | Os12g0143900 | - | Detail |
| C1H12g14180 | 12:2,036,614-2,039,947 | + | C2H12g14580 | CX12g018054 | LOC_Os12g05000 | Os12g0144000 | - | Detail |
| C1H12g00146 | 12:2,042,619-2,046,522 | + | C2H12g26458 | CX12g015780 | LOC_Os12g05020 | Os12g0144200 | - | Detail |
| C1H12g05256 | 12:2,060,087-2,062,513 | + | C2H12g10724 | CX12g018220 | LOC_Os12g05040 | Os12g0144600 | - | Detail |
| C1H12g22183 | 12:2,089,272-2,092,419 | - | C2H12g16995 | CX12g015697 | LOC_Os12g05050 | Os12g0145100 | - | Detail |
| C1H12g30331 | 12:2,103,104-2,106,502 | + | C2H12g10193 | CX12g015693 | LOC_Os12g05080 | Os12g0145400 | - | Detail |
| C1H12g05368 | 12:2,108,237-2,111,300 | + | C2H12g10516 | CX12g018278 | LOC_Os12g05090 | Os12g0145500 | - | Detail |
| C1H12g27500 | 12:2,112,187-2,114,890 | + | C2H12g04534 | CX12g018616 | LOC_Os11g05100 | Os11g0148400 | - | Detail |
| C1H12g17220 | 12:2,115,396-2,119,755 | - | C2H12g14726 | CX12g018156 | LOC_Os12g05110 | Os12g0145700 | OsPK4 | Detail |
| C1H12g13628 | 12:2,121,163-2,124,075 | - | C2H12g30566 | CX12g015785 | LOC_Os12g05120 | Os12g0145900 | - | Detail |
| C1H12g01108 | 12:2,135,485-2,136,298 | - | C2H12g15061 | CX12g018716 | LOC_Os12g05170 | Os12g0146400 | - | Detail |
| C1H12g25187 | 12:2,138,107-2,139,844 | - | C2H12g20480 | CX12g018292 | LOC_Os12g05180 | Os12g0146500 | - | Detail |
| C1H12g12080 | 12:2,156,235-2,159,471 | + | C2H12g30172 | CX12g016051 | LOC_Os12g05200 | Os12g0147000 | OsAHL20 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g006665 | 1:25,745,690-25,748,364 | - | C1H1g31100 | C2H1g21453 | LOC_Os01g50259 | Os01g0697400 | - | Detail |
| CX1g003651 | 1:25,759,507-25,760,535 | - | - | - | LOC_Os01g50310 | Os01g0698000 | - | Detail |
| CX1g002929 | 1:25,762,264-25,762,754 | - | - | C2H8g28836 | - | - | - | Detail |
| CX1g002329 | 1:25,763,707-25,768,961 | + | C1H1g00835 | C2H1g28295 | LOC_Os01g50320 | Os01g0698100 | - | Detail |
| CX1g004672 | 1:25,769,419-25,770,438 | - | - | - | LOC_Os01g50330 | Os01g0698200 | - | Detail |
| CX1g000760 | 1:25,771,967-25,774,141 | + | C1H1g04459 | C2H1g16612 | LOC_Os01g50340 | Os01g0698300 | - | Detail |
| CX1g006494 | 1:25,789,481-25,790,095 | + | C1H1g03032 | C2H1g02009 | - | - | - | Detail |
| CX1g000817 | 1:25,792,043-25,792,679 | - | - | - | LOC_Os01g50350 | Os01g0698800 | - | Detail |
| CX1g005385 | 1:25,803,658-25,807,618 | + | C1H1g20270 | C2H1g21203 | LOC_Os01g50370 | Os01g0699100 | OsMAPKKK63 | Detail |
| CX1g005831 | 1:25,813,987-25,815,234 | + | C1H1g20270 | C2H1g21203 | LOC_Os01g50400 | Os01g0699400 | - | Detail |
| CX1g006267 | 1:25,817,734-25,821,042 | - | C1H1g31868 | C2H1g26478 | LOC_Os01g50410 | Os01g0699500 | OsMKKK70 | Detail |
| CX1g004661 | 1:25,825,991-25,827,750 | - | C1H1g30510 | C2H1g04109 | LOC_Os01g50420 | Os01g0699600 | MKKK62 | Detail |
| CX1g001816 | 1:25,834,943-25,835,789 | + | C1H1g24072 | C2H1g24593 | LOC_Os01g50440 | Os01g0699900 | - | Detail |
| CX1g001717 | 1:25,847,757-25,848,953 | + | C1H1g23581 | C2H1g02985 | LOC_Os01g50450 | Os01g0700000 | - | Detail |
| CX1g003134 | 1:25,852,826-25,854,144 | + | C1H1g27989 | C2H1g06417 | LOC_Os01g50460 | Os01g0700100 | - | Detail |
| CX1g003322 | 1:25,856,078-25,860,614 | + | C1H1g17202 | C2H1g25689 | LOC_Os01g50470 | Os01g0700200 | - | Detail |
| CX1g002074 | 1:25,861,906-25,863,395 | - | C1H1g19643 | C2H1g26664 | LOC_Os01g50480 | Os01g0701700 | - | Detail |
| CX1g003729 | 1:25,871,982-25,873,605 | + | C1H1g22663 | C2H1g16684 | LOC_Os01g50490 | Os01g0700500 | - | Detail |
| CX1g006346 | 1:25,899,497-25,899,919 | - | - | - | - | - | - | Detail |
| CX1g003918 | 1:25,915,546-25,919,039 | + | C1H1g16347 | C2H1g26426 | LOC_Os01g50590 | Os01g0701500 | Os1500, CYP711A4 | Detail |