| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g01638 | 12:19,168,136-19,170,832 | + | C2H12g11112 | CX12g017446 | LOC_Os12g38560 | Os12g0573900 | - | Detail |
| C1H12g01733 | 12:19,185,194-19,188,492 | - | C2H12g14541 | CX12g018735 | LOC_Os12g38570 | Os12g0574000 | - | Detail |
| C1H12g11315 | 12:19,200,267-19,209,933 | + | C2H12g27516 | CX12g018184 | LOC_Os12g38590 | Os12g0574400 | - | Detail |
| C1H12g22967 | 12:19,210,943-19,213,015 | - | C2H12g29399 | CX12g016154 | LOC_Os12g38610 | Os12g0574700 | - | Detail |
| C1H12g27164 | 12:19,232,054-19,233,151 | - | C2H12g29632 | CX12g017251 | LOC_Os12g38620 | Os12g0574800 | - | Detail |
| C1H12g15350 | 12:19,233,737-19,238,689 | - | C2H12g21362 | CX12g018328 | LOC_Os12g38630 | Os12g0574900 | - | Detail |
| C1H12g09502 | 12:19,239,778-19,240,434 | - | C2H12g24789 | CX12g015885 | LOC_Os12g38640 | Os12g0575000 | - | Detail |
| C1H12g14366 | 12:19,241,010-19,241,175 | + | - | - | LOC_Os12g38650 | Os12g0575200 | - | Detail |
| C1H12g19934 | 12:19,245,063-19,245,371 | - | C2H12g10258 | CX12g017838 | LOC_Os12g38720 | Os12g0575300 | - | Detail |
| C1H12g12899 | 12:19,256,388-19,259,259 | - | C2H12g00857 | CX12g015511 | LOC_Os12g38730 | Os12g0576300 | - | Detail |
| C1H12g10259 | 12:19,262,646-19,271,551 | - | C2H12g17120 | CX12g016341 | LOC_Os12g38750 | Os12g0576600 | - | Detail |
| C1H12g21793 | 12:19,283,944-19,287,697 | - | C2H12g04894 | CX12g017028 | LOC_Os12g38760 | Os12g0576700 | - | Detail |
| C1H12g30700 | 12:19,289,763-19,292,909 | - | C2H12g26878 | CX12g016600 | LOC_Os12g38770 | Os12g0576750 | PAP1B, OsPAP1b, NPP2, OsNPP2 | Detail |
| C1H12g05519 | 12:19,294,226-19,300,697 | - | C2H12g26810 | CX12g017595 | LOC_Os12g38780 | Os12g0576900 | - | Detail |
| C1H12g22000 | 12:19,303,109-19,305,330 | + | C2H12g06238 | CX12g017201 | LOC_Os12g38790 | Os12g0577000 | - | Detail |
| C1H12g15638 | 12:19,306,400-19,314,241 | + | C2H12g22098 | CX12g016939 | LOC_Os12g38800 | Os12g0577100 | - | Detail |
| C1H12g30406 | 12:19,320,157-19,321,197 | + | C2H12g08874 | CX12g017608 | LOC_Os12g38810 | Os12g0577200 | - | Detail |
| C1H12g21439 | 12:19,341,758-19,346,886 | + | C2H12g22738 | CX12g015208 | LOC_Os12g38850 | Os12g0577600 | - | Detail |
| C1H12g00519 | 12:19,348,331-19,350,779 | - | C2H12g29158 | CX12g018076 | LOC_Os12g38860 | Os12g0577700 | - | Detail |
| C1H12g23780 | 12:19,350,096-19,354,822 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042639 | 6:24,667,777-24,672,588 | - | C1H6g30642 | C2H6g08388 | LOC_Os06g46350 | Os06g0677000 | DEP3, OspPLAIIIδ | Detail |
| CX6g043789 | 6:24,693,683-24,697,301 | + | C1H6g11720 | C2H6g24564 | LOC_Os06g46366 | Os06g0677300 | - | Detail |
| CX6g045150 | 6:24,699,520-24,701,964 | + | C1H6g31002 | C2H6g27620 | LOC_Os06g46372 | Os06g0677400 | - | Detail |
| CX6g042145 | 6:24,703,928-24,707,980 | + | C1H6g05901 | C2H6g16974 | LOC_Os06g46380 | Os06g0677500 | - | Detail |
| CX6g042294 | 6:24,709,086-24,709,355 | - | C1H6g18418 | C2H6g10162 | LOC_Os06g46390 | Os06g0677600 | - | Detail |
| CX6g042249 | 6:24,711,121-24,716,241 | + | C1H6g07635 | C2H6g18268 | LOC_Os06g46400 | Os06g0677700 | - | Detail |
| CX6g043778 | 6:24,718,632-24,723,756 | - | C1H6g07372 | C2H6g18312 | LOC_Os06g46410 | Os06g0677800 | OsARF17 | Detail |
| CX6g044355 | 6:24,729,403-24,729,657 | - | - | - | - | - | - | Detail |
| CX6g045136 | 6:24,745,053-24,746,303 | + | C1H6g28341 | C2H6g19101 | LOC_Os06g46440 | Os06g0678100 | - | Detail |
| CX6g043297 | 6:24,746,902-24,751,586 | - | C1H6g28764 | C2H6g22903 | LOC_Os06g46450 | Os06g0678200 | OsSPS1 | Detail |
| CX6g045775 | 6:24,759,785-24,760,126 | + | C1H6g19095 | - | LOC_Os06g46460 | Os06g0678500 | - | Detail |
| CX6g045884 | 6:24,761,187-24,784,770 | - | C1H6g09244 | C2H6g14411 | LOC_Os06g46470 | Os06g0678650 | - | Detail |
| CX6g044487 | 6:24,791,459-24,795,034 | - | C1H6g29289 | C2H6g04962 | LOC_Os06g46500 | Os06g0678800 | - | Detail |
| CX6g041769 | 6:24,797,935-24,798,093 | - | - | - | - | - | - | Detail |
| CX6g045315 | 6:24,811,834-24,813,971 | - | C1H6g05442 | C2H6g00139 | LOC_Os06g46560 | Os06g0679400 | - | Detail |
| CX6g044194 | 6:24,815,340-24,815,646 | + | - | C2H6g08994 | - | - | - | Detail |
| CX6g041450 | 6:24,816,990-24,820,455 | + | C1H6g06002 | C2H6g04537 | LOC_Os06g46570 | Os06g0679500 | - | Detail |
| CX6g044581 | 6:24,821,695-24,822,153 | + | C1H6g24808 | - | LOC_Os06g46580 | Os06g0679600 | - | Detail |
| CX6g042651 | 6:24,822,801-24,826,370 | - | C1H6g10559 | C2H6g25589 | LOC_Os06g46590 | Os06g0679700 | - | Detail |
| CX6g043258 | 6:24,828,005-24,834,264 | + | C1H6g03127 | C2H6g11527 | LOC_Os06g46600 | Os06g0679800 | - | Detail |