| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g11864 | 1:17,096,261-17,096,714 | + | C1H1g07615 | - | LOC_Os01g33160 | Os01g0516200 | - | Detail |
| C2H1g16479 | 1:17,097,920-17,098,963 | + | C1H1g07615 | - | LOC_Os01g33160 | Os01g0516200 | - | Detail |
| C2H1g29780 | 1:17,113,489-17,115,504 | - | C1H1g14011 | CX1g001599 | - | Os01g0298301 | - | Detail |
| C2H1g11260 | 1:17,117,421-17,119,306 | + | C1H1g03884 | - | LOC_Os01g33160 | Os01g0516600 | - | Detail |
| C2H1g29427 | 1:17,123,499-17,129,290 | - | C1H1g13083 | CX1g000632 | LOC_Os01g33230 | Os01g0516700 | - | Detail |
| C2H1g12851 | 1:17,133,168-17,133,446 | + | - | CX1g003534 | - | - | - | Detail |
| C2H1g22414 | 1:17,133,862-17,146,800 | - | C1H1g03571 | CX1g005992 | LOC_Os01g33260 | Os01g0516900 | - | Detail |
| C2H1g00935 | 1:17,162,879-17,164,306 | - | C1H1g26291 | CX1g004281 | LOC_Os01g33300 | Os01g0517500 | OsPG2 | Detail |
| C2H1g19175 | 1:17,179,764-17,180,536 | - | C1H1g15043 | CX1g001381 | LOC_Os01g33350 | Os01g0517800 | OsFl3 | Detail |
| C2H1g11828 | 1:17,184,142-17,186,197 | + | C1H1g16914 | CX1g005386 | LOC_Os01g33360 | Os01g0517900 | - | Detail |
| C2H1g06564 | 1:17,189,528-17,191,193 | - | C1H1g19776 | CX1g001381 | LOC_Os01g33370 | Os01g0518000 | - | Detail |
| C2H1g15782 | 1:17,221,122-17,225,643 | - | C1H1g04145 | CX1g004547 | LOC_Os01g33400 | Os01g0519700 | - | Detail |
| C2H1g11609 | 1:17,232,924-17,240,066 | - | C1H1g01073 | CX1g000474 | LOC_Os01g33420 | Os01g0518500 | - | Detail |
| C2H1g02009 | 1:17,240,893-17,242,225 | + | C1H1g03032 | CX1g001414 | - | - | - | Detail |
| C2H1g08274 | 1:17,245,664-17,255,985 | - | C1H1g14202 | CX1g003150 | - | Os01g0518651 | - | Detail |
| C2H1g08445 | 1:17,260,529-17,261,242 | - | C1H1g06909 | - | - | - | - | Detail |
| C2H1g21312 | 1:17,284,109-17,291,458 | + | C1H1g27418 | CX1g005208 | LOC_Os08g09860 | - | - | Detail |
| C2H1g17187 | 1:17,314,202-17,314,786 | + | C1H1g28314 | CX1g003392 | LOC_Os01g33670 | Os01g0520500 | - | Detail |
| C2H1g08242 | 1:17,315,778-17,320,987 | - | C1H1g02683 | CX1g006219 | LOC_Os01g33684 | Os01g0520600 | - | Detail |
| C2H1g00800 | 1:17,369,559-17,377,378 | + | C1H1g04217 | CX1g002325 | LOC_Os01g33784 | Os01g0521400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044031 | 6:24,354,691-24,354,939 | - | - | - | - | - | - | Detail |
| CX6g042065 | 6:24,364,702-24,366,932 | - | C1H6g06589 | C2H6g07492 | - | - | - | Detail |
| CX6g044377 | 6:24,375,268-24,378,017 | - | C1H6g04560 | C2H6g16269 | LOC_Os06g46120 | Os06g0672700 | - | Detail |
| CX6g044025 | 6:24,405,139-24,405,700 | + | C1H6g22963 | - | - | - | - | Detail |
| CX6g042629 | 6:24,408,711-24,409,676 | - | C1H6g06204 | C2H6g03521 | - | Os06g0674000 | - | Detail |
| CX6g042451 | 6:24,426,097-24,426,447 | - | C1H6g15821 | - | LOC_Os06g46140 | Os06g0673800 | - | Detail |
| CX6g044991 | 6:24,430,528-24,433,932 | - | C1H6g14950 | C2H6g03862 | - | Os06g0674000 | - | Detail |
| CX6g042272 | 6:24,495,398-24,496,882 | + | C1H6g00339 | C2H6g06263 | LOC_Os06g49430 | Os06g0708000 | BWMK1, OsBWMK1M | Detail |
| CX6g041582 | 6:24,516,565-24,516,961 | - | - | - | - | - | - | Detail |
| CX6g042534 | 6:24,519,243-24,521,326 | - | C1H6g07308 | C2H6g12192 | LOC_Os06g49050 | Os06g0704000 | - | Detail |
| CX6g041920 | 6:24,573,841-24,578,181 | + | C1H6g03179 | C2H6g00947 | LOC_Os06g46240 | Os06g0674800 | - | Detail |
| CX6g043181 | 6:24,584,050-24,585,300 | - | C1H6g26263 | - | LOC_Os06g46250 | Os06g0675200 | LIN1 | Detail |
| CX6g042717 | 6:24,601,210-24,604,817 | + | C1H6g03218 | C2H6g16522 | LOC_Os06g46270 | Os06g0675600 | OsY37, ONAC011 | Detail |
| CX6g042747 | 6:24,608,540-24,612,725 | - | C1H6g29534 | C2H6g30405 | LOC_Os06g46284 | Os06g0675700 | ONG3 | Detail |
| CX6g043872 | 6:24,620,341-24,624,687 | - | C1H6g05961 | C2H6g20637 | LOC_Os06g46310 | Os06g0676000 | NRAMP3, OsNramp3, OsNRAMP3 | Detail |
| CX6g041842 | 6:24,630,184-24,630,363 | + | - | - | - | Os02g0188201 | - | Detail |
| CX6g042843 | 6:24,643,266-24,643,481 | + | - | - | - | - | - | Detail |
| CX6g042266 | 6:24,646,311-24,646,583 | + | - | - | - | Os06g0676500 | - | Detail |
| CX6g042075 | 6:24,647,081-24,649,139 | - | C1H6g12474 | C2H6g24034 | LOC_Os06g46330 | Os06g0676600 | - | Detail |
| CX6g041293 | 6:24,657,665-24,661,665 | + | C1H6g29534 | C2H6g04890 | LOC_Os06g46340 | Os06g0676700 | - | Detail |