| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g10870 | 5:2,764,057-2,769,694 | - | C1H5g01429 | CX5g037873 | LOC_Os05g06350 | Os05g0155601 | Imp a1b, Imp3 | Detail |
| C2H5g10571 | 5:2,772,256-2,777,648 | + | C1H5g05444 | CX5g036886 | LOC_Os05g06360 | Os05g0155700 | - | Detail |
| C2H5g29906 | 5:2,783,261-2,784,652 | + | C1H5g08048 | CX5g040299 | LOC_Os05g06380 | Os05g0155800 | - | Detail |
| C2H5g30592 | 5:2,792,434-2,793,738 | + | C1H5g08048 | CX5g040434 | LOC_Os05g06380 | Os05g0155800 | - | Detail |
| C2H5g22135 | 5:2,799,478-2,802,268 | + | C1H5g20577 | CX5g040720 | LOC_Os05g06420 | Os05g0156200 | - | Detail |
| C2H5g24185 | 5:2,804,420-2,807,812 | - | C1H5g09510 | CX5g039738 | LOC_Os05g06430 | Os05g0156300 | - | Detail |
| C2H5g26310 | 5:2,815,955-2,820,288 | + | C1H5g09608 | CX5g036765 | LOC_Os05g06440 | Os05g0156500 | - | Detail |
| C2H5g19277 | 5:2,820,449-2,825,519 | - | C1H5g14046 | CX5g037146 | LOC_Os05g06450 | Os05g0156600 | - | Detail |
| C2H5g05970 | 5:2,827,521-2,834,014 | - | C1H5g24964 | CX5g038153 | LOC_Os05g06460 | Os05g0156700 | OsLPD1 | Detail |
| C2H5g20269 | 5:2,838,758-2,850,343 | + | C1H5g24978 | CX5g038021 | LOC_Os05g06470 | Os05g0156800 | - | Detail |
| C2H5g09414 | 5:2,851,034-2,855,117 | - | C1H5g24292 | CX5g037368 | LOC_Os05g06480 | Os05g0156900 | Chalk5 | Detail |
| C2H5g11758 | 5:2,860,791-2,863,087 | - | C1H5g00102 | CX5g037609 | LOC_Os05g06500 | Os05g0157200 | - | Detail |
| C2H5g06394 | 5:2,864,710-2,868,737 | - | C1H5g31378 | CX5g036870 | LOC_Os05g06510 | Os05g0157300 | - | Detail |
| C2H5g00238 | 5:2,873,275-2,874,014 | + | C1H5g16317 | CX5g039713 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| C2H5g01907 | 5:2,874,310-2,876,762 | + | C1H5g16317 | CX5g039713 | LOC_Os05g06630 | Os05g0158200 | - | Detail |
| C2H5g29731 | 5:2,882,126-2,886,279 | + | C1H5g16317 | CX5g040970 | LOC_Os05g06540 | Os05g0157600 | - | Detail |
| C2H5g15119 | 5:2,938,106-2,941,501 | + | C1H5g16317 | CX5g038380 | LOC_Os05g06630 | Os05g0158200 | - | Detail |
| C2H5g22849 | 5:2,947,907-2,951,658 | + | C1H5g05673 | CX5g039850 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| C2H5g05727 | 5:2,952,931-2,957,012 | - | C1H5g28371 | CX5g037102 | LOC_Os05g06660 | Os05g0158500 | GS5, OsSCP26 | Detail |
| C2H5g19140 | 5:2,973,259-2,979,155 | + | C1H5g06427 | CX5g037159 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043500 | 6:24,142,387-24,145,106 | - | C1H6g20694 | C2H6g25038 | LOC_Os06g45820 | Os06g0669400 | - | Detail |
| CX6g044000 | 6:24,146,500-24,151,373 | - | C1H6g23149 | C2H6g05104 | LOC_Os06g45830 | Os06g0669600 | - | Detail |
| CX6g045263 | 6:24,153,213-24,158,456 | - | C1H6g31724 | C2H6g22335 | LOC_Os06g45840 | Os06g0669700 | - | Detail |
| CX6g045652 | 6:24,162,197-24,164,455 | + | C1H6g00602 | C2H6g18735 | LOC_Os06g45850 | Os06g0669800 | - | Detail |
| CX6g043559 | 6:24,167,133-24,173,619 | + | C1H6g07995 | C2H6g08786 | LOC_Os06g45860 | Os06g0670000 | OsABA3, OsMoCo | Detail |
| CX6g045609 | 6:24,174,789-24,178,695 | - | C1H6g01410 | C2H6g26188 | LOC_Os06g45870 | Os06g0670100 | - | Detail |
| CX6g042383 | 6:24,190,690-24,193,178 | + | C1H6g02628 | C2H6g07543 | LOC_Os06g45890 | Os06g0670300 | OsMPH1, OsMYB45 | Detail |
| CX6g043866 | 6:24,196,867-24,197,346 | - | - | - | - | - | - | Detail |
| CX6g043540 | 6:24,203,537-24,211,745 | + | C1H6g16277 | C2H6g13187 | LOC_Os06g45900 | Os06g0670400 | - | Detail |
| CX6g044214 | 6:24,213,367-24,218,843 | + | C1H6g01420 | C2H6g13187 | LOC_Os06g45910 | Os06g0670500 | - | Detail |
| CX6g044820 | 6:24,221,472-24,222,713 | + | C1H6g27698 | C2H6g29164 | LOC_Os06g45920 | Os06g0670633 | - | Detail |
| CX6g042532 | 6:24,254,379-24,261,195 | + | C1H6g11043 | C2H6g07645 | LOC_Os06g45940 | Os06g0671000 | - | Detail |
| CX6g043496 | 6:24,265,330-24,265,746 | - | C1H6g12965 | C2H6g06613 | LOC_Os06g45950 | Os06g0671150 | - | Detail |
| CX6g043201 | 6:24,279,071-24,281,756 | - | C1H6g05593 | C2H6g23053 | LOC_Os06g45960 | Os06g0671300 | - | Detail |
| CX6g045889 | 6:24,304,798-24,305,142 | + | C1H6g13886 | C2H6g06613 | LOC_Os06g45970 | Os06g0671150 | - | Detail |
| CX6g041235 | 6:24,309,536-24,316,781 | + | C1H6g19408 | C2H6g22756 | LOC_Os06g45980 | Os06g0671700 | - | Detail |
| CX6g042168 | 6:24,318,183-24,320,033 | + | C1H6g17945 | C2H6g13643 | LOC_Os06g45990 | Os06g0671800 | OsSec14-18 | Detail |
| CX6g043235 | 6:24,320,943-24,323,309 | - | C1H6g20129 | C2H6g13523 | LOC_Os06g46000 | Os06g0671900 | - | Detail |
| CX6g045457 | 6:24,324,316-24,324,504 | - | - | - | - | - | - | Detail |
| CX6g042765 | 6:24,346,797-24,347,624 | - | C1H6g04835 | C2H6g03424 | LOC_Os06g46030 | Os06g0672400 | OsG1L2 | Detail |