| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g10957 | 4:15,270,002-15,274,850 | - | C1H4g23526 | CX4g035973 | LOC_Os04g30430 | Os04g0372800 | - | Detail |
| C2H4g23915 | 4:15,280,849-15,281,550 | + | C1H4g19886 | - | - | - | - | Detail |
| C2H4g15991 | 4:15,282,642-15,285,663 | + | C1H4g17345 | CX4g031881 | LOC_Os04g30450 | Os04g0373000 | - | Detail |
| C2H4g25729 | 4:15,290,286-15,290,513 | + | C1H4g15354 | CX4g034490 | LOC_Os04g30460 | - | - | Detail |
| C2H4g18361 | 4:15,302,768-15,303,096 | + | C1H4g23534 | CX4g034565 | LOC_Os04g30490 | Os04g0373400 | - | Detail |
| C2H4g27653 | 4:15,303,881-15,306,581 | + | C1H4g23534 | CX4g034565 | LOC_Os04g30490 | Os04g0373400 | - | Detail |
| C2H4g16321 | 4:15,350,952-15,356,452 | + | C1H4g09226 | CX4g032818 | LOC_Os04g30610 | Os04g0375300 | - | Detail |
| C2H4g25498 | 4:15,374,314-15,378,838 | + | C1H4g09226 | CX4g032818 | LOC_Os04g30660 | Os04g0375300 | - | Detail |
| C2H4g15638 | 4:15,392,590-15,397,148 | - | C1H4g09945 | CX4g032755 | LOC_Os04g30720 | Os04g0375900 | - | Detail |
| C2H4g24509 | 4:15,402,517-15,403,963 | - | C1H4g09093 | CX4g035820 | LOC_Os02g30050 | Os04g0376000 | - | Detail |
| C2H4g23366 | 4:15,404,901-15,408,517 | - | C1H4g14613 | CX4g036314 | LOC_Os04g30740 | Os04g0376100 | - | Detail |
| C2H4g02514 | 4:15,410,891-15,411,646 | + | C1H4g11665 | CX4g033855 | LOC_Os04g30750 | - | - | Detail |
| C2H4g13161 | 4:15,411,838-15,413,283 | + | C1H4g12135 | CX4g033855 | LOC_Os04g30750 | Os04g0376200 | - | Detail |
| C2H4g28902 | 4:15,416,552-15,421,210 | - | C1H4g11616 | CX4g034926 | LOC_Os04g30760 | Os04g0376300 | OsPLS4 | Detail |
| C2H4g22640 | 4:15,426,774-15,428,288 | - | C1H4g04380 | CX4g034222 | LOC_Os04g30770 | Os04g0376400 | - | Detail |
| C2H4g16376 | 4:15,433,976-15,438,516 | - | C1H4g04365 | CX4g036230 | LOC_Os04g30780 | Os04g0376500 | - | Detail |
| C2H4g13123 | 4:15,440,432-15,442,902 | - | C1H4g01599 | CX4g033110 | LOC_Os04g30790 | Os04g0376600 | - | Detail |
| C2H4g22799 | 4:15,447,246-15,450,378 | - | C1H4g10257 | CX11g013645 | LOC_Os04g30800 | Os04g0376700 | - | Detail |
| C2H4g24581 | 4:15,467,640-15,471,482 | + | C1H4g19859 | CX4g034805 | LOC_Os04g30880 | Os04g0377600 | - | Detail |
| C2H4g01775 | 4:15,472,365-15,476,696 | - | C1H4g31829 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041502 | 6:23,804,642-23,806,368 | - | C1H6g11988 | C2H6g13796 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| CX6g045945 | 6:23,808,222-23,809,256 | - | C1H6g24851 | C2H6g08478 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| CX6g044060 | 6:23,819,442-23,823,405 | + | C1H6g25709 | C2H6g14212 | LOC_Os06g45350 | Os06g0663900 | - | Detail |
| CX6g042626 | 6:23,823,877-23,824,206 | - | - | - | - | Os06g0664000 | - | Detail |
| CX6g045376 | 6:23,825,502-23,825,957 | + | C1H6g04386 | C2H6g28732 | - | - | - | Detail |
| CX6g042007 | 6:23,826,076-23,826,507 | + | - | C2H6g14654 | - | - | - | Detail |
| CX6g044758 | 6:23,827,727-23,835,630 | - | C1H6g08767 | C2H6g24826 | LOC_Os06g45360 | Os06g0664100 | - | Detail |
| CX6g042887 | 6:23,837,106-23,839,157 | - | C1H6g30945 | C2H6g00789 | LOC_Os06g45370 | Os06g0664200 | - | Detail |
| CX6g042503 | 6:23,849,987-23,856,303 | + | C1H6g08586 | C2H6g19748 | LOC_Os06g45380 | Os06g0664300 | OsVSR6 | Detail |
| CX6g044595 | 6:23,857,525-23,860,720 | - | C1H6g03094 | C2H6g01763 | LOC_Os06g45390 | Os06g0664400 | - | Detail |
| CX6g045983 | 6:23,869,439-23,872,546 | + | C1H6g02505 | C2H6g14833 | LOC_Os06g45410 | Os06g0664800 | - | Detail |
| CX6g041356 | 6:23,878,910-23,882,185 | + | C1H6g15108 | C2H6g00067 | LOC_Os06g45430 | Os06g0665000 | - | Detail |
| CX6g041675 | 6:23,883,018-23,884,008 | - | C1H6g06152 | C2H6g17880 | LOC_Os06g45440 | Os06g0665100 | - | Detail |
| CX6g045958 | 6:23,885,882-23,887,129 | - | C1H6g22830 | C2H6g03277 | LOC_Os06g45450 | Os06g0665200 | - | Detail |
| CX6g044365 | 6:23,890,767-23,890,994 | + | - | - | - | - | - | Detail |
| CX6g045292 | 6:23,893,709-23,895,020 | - | C1H6g16253 | C2H6g02226 | LOC_Os06g45460 | Os06g0665400 | APO1, apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393 | Detail |
| CX6g045511 | 6:23,907,875-23,911,348 | + | C1H5g01573 | C2H7g04084 | - | - | - | Detail |
| CX6g042079 | 6:23,911,929-23,916,037 | - | C1H6g09339 | C2H6g26324 | LOC_Os06g45480 | Os06g0665500 | OsAAH | Detail |
| CX6g044663 | 6:23,917,228-23,917,467 | - | - | - | - | - | - | Detail |
| CX6g045639 | 6:23,924,922-23,930,954 | - | C1H6g29065 | C2H6g03492 | LOC_Os06g45500 | Os06g0665800 | HMA9, OsHMA9 ,oshma9-1, oshma9-2, HMA9 | Detail |