| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g09134 | 9:18,283,609-18,284,034 | + | C1H9g19437 | - | LOC_Os09g37490 | Os09g0547000 | - | Detail |
| C2H9g15534 | 9:18,285,220-18,285,654 | + | C1H9g16498 | - | LOC_Os09g37480 | Os09g0546900 | - | Detail |
| C2H9g23012 | 9:18,288,480-18,288,914 | - | C1H9g12140 | - | LOC_Os09g37460 | Os09g0546700 | - | Detail |
| C2H9g06677 | 9:18,291,375-18,291,842 | + | C1H9g15403 | - | LOC_Os09g37344 | Os09g0545400 | - | Detail |
| C2H9g19459 | 9:18,295,893-18,297,499 | + | C1H9g03784 | - | LOC_Os09g37344 | Os09g0545400 | - | Detail |
| C2H9g25494 | 9:18,297,100-18,297,522 | - | C1H9g24888 | - | LOC_Os09g37410 | Os09g0546200 | - | Detail |
| C2H9g30658 | 9:18,299,362-18,299,787 | - | C1H9g13035 | - | LOC_Os09g37400 | Os09g0546100 | OsSAUR45, SAUR45 | Detail |
| C2H9g29596 | 9:18,299,435-18,299,764 | + | C1H9g00230 | - | LOC_Os09g37344 | Os09g0545400 | - | Detail |
| C2H9g11422 | 9:18,301,489-18,301,923 | - | C1H9g16498 | - | LOC_Os09g37394 | Os09g0546900 | - | Detail |
| C2H9g26450 | 9:18,308,574-18,310,420 | + | - | - | - | - | - | Detail |
| C2H9g28228 | 9:18,310,649-18,311,074 | - | C1H9g01293 | - | LOC_Os09g37369 | Os09g0545700 | - | Detail |
| C2H9g13805 | 9:18,310,707-18,313,375 | + | C1H9g15403 | - | LOC_Os09g37360 | Os09g0545650 | - | Detail |
| C2H9g26386 | 9:18,314,076-18,314,498 | - | C1H9g22535 | - | LOC_Os09g37369 | Os09g0545700 | - | Detail |
| C2H9g28207 | 9:18,316,394-18,316,831 | + | C1H9g13292 | - | LOC_Os09g37460 | Os09g0546700 | - | Detail |
| C2H9g28262 | 9:18,320,729-18,321,767 | + | C1H9g13292 | - | LOC_Os09g37460 | Os09g0546700 | - | Detail |
| C2H9g06948 | 9:18,322,895-18,323,353 | + | C1H9g07247 | - | LOC_Os09g37500 | Os09g0547100 | - | Detail |
| C2H9g26899 | 9:18,323,910-18,326,294 | - | C1H9g03915 | CX9g057441 | LOC_Os09g37510 | Os09g0547200 | - | Detail |
| C2H9g03178 | 9:18,346,205-18,352,113 | + | C1H9g15355 | CX9g056795 | LOC_Os09g37520 | Os09g0547300 | - | Detail |
| C2H9g17799 | 9:18,370,871-18,372,500 | + | C1H9g27743 | CX9g054942 | LOC_Os09g37540 | Os09g0547500 | LOGL9 | Detail |
| C2H9g02472 | 9:18,380,328-18,381,499 | + | C1H9g22751 | CX9g055014 | LOC_Os09g37570 | Os09g0547800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041502 | 6:23,804,642-23,806,368 | - | C1H6g11988 | C2H6g13796 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| CX6g045945 | 6:23,808,222-23,809,256 | - | C1H6g24851 | C2H6g08478 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| CX6g044060 | 6:23,819,442-23,823,405 | + | C1H6g25709 | C2H6g14212 | LOC_Os06g45350 | Os06g0663900 | - | Detail |
| CX6g042626 | 6:23,823,877-23,824,206 | - | - | - | - | Os06g0664000 | - | Detail |
| CX6g045376 | 6:23,825,502-23,825,957 | + | C1H6g04386 | C2H6g28732 | - | - | - | Detail |
| CX6g042007 | 6:23,826,076-23,826,507 | + | - | C2H6g14654 | - | - | - | Detail |
| CX6g044758 | 6:23,827,727-23,835,630 | - | C1H6g08767 | C2H6g24826 | LOC_Os06g45360 | Os06g0664100 | - | Detail |
| CX6g042887 | 6:23,837,106-23,839,157 | - | C1H6g30945 | C2H6g00789 | LOC_Os06g45370 | Os06g0664200 | - | Detail |
| CX6g042503 | 6:23,849,987-23,856,303 | + | C1H6g08586 | C2H6g19748 | LOC_Os06g45380 | Os06g0664300 | OsVSR6 | Detail |
| CX6g044595 | 6:23,857,525-23,860,720 | - | C1H6g03094 | C2H6g01763 | LOC_Os06g45390 | Os06g0664400 | - | Detail |
| CX6g045983 | 6:23,869,439-23,872,546 | + | C1H6g02505 | C2H6g14833 | LOC_Os06g45410 | Os06g0664800 | - | Detail |
| CX6g041356 | 6:23,878,910-23,882,185 | + | C1H6g15108 | C2H6g00067 | LOC_Os06g45430 | Os06g0665000 | - | Detail |
| CX6g041675 | 6:23,883,018-23,884,008 | - | C1H6g06152 | C2H6g17880 | LOC_Os06g45440 | Os06g0665100 | - | Detail |
| CX6g045958 | 6:23,885,882-23,887,129 | - | C1H6g22830 | C2H6g03277 | LOC_Os06g45450 | Os06g0665200 | - | Detail |
| CX6g044365 | 6:23,890,767-23,890,994 | + | - | - | - | - | - | Detail |
| CX6g045292 | 6:23,893,709-23,895,020 | - | C1H6g16253 | C2H6g02226 | LOC_Os06g45460 | Os06g0665400 | APO1, apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393 | Detail |
| CX6g045511 | 6:23,907,875-23,911,348 | + | C1H5g01573 | C2H7g04084 | - | - | - | Detail |
| CX6g042079 | 6:23,911,929-23,916,037 | - | C1H6g09339 | C2H6g26324 | LOC_Os06g45480 | Os06g0665500 | OsAAH | Detail |
| CX6g044663 | 6:23,917,228-23,917,467 | - | - | - | - | - | - | Detail |
| CX6g045639 | 6:23,924,922-23,930,954 | - | C1H6g29065 | C2H6g03492 | LOC_Os06g45500 | Os06g0665800 | HMA9, OsHMA9 ,oshma9-1, oshma9-2, HMA9 | Detail |