| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g01813 | 9:10,729,399-10,734,096 | - | C1H9g24976 | CX9g056686 | - | - | - | Detail |
| C2H9g06042 | 9:10,751,001-10,754,736 | - | C1H9g13452 | CX9g056188 | LOC_Os09g20880 | Os09g0375600 | CSK1 | Detail |
| C2H9g06978 | 9:10,761,883-10,763,955 | + | C1H9g23247 | CX9g056282 | LOC_Os09g20900 | Os09g0375900 | - | Detail |
| C2H9g12486 | 9:10,765,080-10,770,371 | - | C1H9g14764 | CX9g057975 | LOC_Os09g20910 | - | - | Detail |
| C2H9g01319 | 9:10,771,045-10,772,705 | - | C1H9g17073 | CX9g057975 | LOC_Os09g20910 | Os09g0376000 | - | Detail |
| C2H9g11359 | 9:10,783,886-10,786,421 | + | C1H9g16054 | CX9g055108 | LOC_Os09g20930 | Os09g0376300 | - | Detail |
| C2H9g21285 | 9:10,803,589-10,806,078 | + | C1H9g23707 | CX9g058046 | LOC_Os09g20970 | Os09g0376600 | - | Detail |
| C2H9g05383 | 9:10,821,705-10,827,600 | - | C1H9g30567 | CX9g055601 | LOC_Os09g20990 | Os09g0376800 | - | Detail |
| C2H9g05268 | 9:10,840,645-10,845,327 | - | C1H9g29995 | CX9g056662 | LOC_Os09g21000 | Os09g0376900 | - | Detail |
| C2H9g18923 | 9:10,901,393-10,902,834 | + | - | CX9g055991 | - | - | - | Detail |
| C2H9g05150 | 9:10,904,121-10,905,428 | + | - | CX9g055991 | - | - | - | Detail |
| C2H9g29771 | 9:10,907,482-10,912,636 | + | C1H12g26040 | CX9g058196 | LOC_Os08g15590 | Os10g0428200 | - | Detail |
| C2H9g20413 | 9:10,934,950-10,935,201 | - | C1H9g21881 | CX9g057809 | LOC_Os09g21090 | - | - | Detail |
| C2H9g01045 | 9:10,940,521-10,946,887 | + | C1H9g20818 | - | LOC_Os09g21100 | - | - | Detail |
| C2H9g29285 | 9:10,950,323-10,956,536 | - | C1H9g31308 | CX9g055569 | LOC_Os09g21110 | Os09g0378300 | - | Detail |
| C2H9g17709 | 9:10,959,464-10,960,758 | - | C1H9g27440 | - | - | - | - | Detail |
| C2H9g08457 | 9:10,960,760-10,961,462 | - | - | - | - | - | - | Detail |
| C2H9g05334 | 9:10,993,241-10,995,032 | - | C1H9g04683 | CX9g056901 | LOC_Os09g21170 | Os09g0379400 | - | Detail |
| C2H9g04315 | 9:10,997,274-10,999,719 | + | C1H9g09879 | - | - | - | - | Detail |
| C2H9g13405 | 9:11,002,652-11,004,127 | - | C1H9g16223 | CX9g056457 | LOC_Os09g21170 | Os09g0379400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041502 | 6:23,804,642-23,806,368 | - | C1H6g11988 | C2H6g13796 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| CX6g045945 | 6:23,808,222-23,809,256 | - | C1H6g24851 | C2H6g08478 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| CX6g044060 | 6:23,819,442-23,823,405 | + | C1H6g25709 | C2H6g14212 | LOC_Os06g45350 | Os06g0663900 | - | Detail |
| CX6g042626 | 6:23,823,877-23,824,206 | - | - | - | - | Os06g0664000 | - | Detail |
| CX6g045376 | 6:23,825,502-23,825,957 | + | C1H6g04386 | C2H6g28732 | - | - | - | Detail |
| CX6g042007 | 6:23,826,076-23,826,507 | + | - | C2H6g14654 | - | - | - | Detail |
| CX6g044758 | 6:23,827,727-23,835,630 | - | C1H6g08767 | C2H6g24826 | LOC_Os06g45360 | Os06g0664100 | - | Detail |
| CX6g042887 | 6:23,837,106-23,839,157 | - | C1H6g30945 | C2H6g00789 | LOC_Os06g45370 | Os06g0664200 | - | Detail |
| CX6g042503 | 6:23,849,987-23,856,303 | + | C1H6g08586 | C2H6g19748 | LOC_Os06g45380 | Os06g0664300 | OsVSR6 | Detail |
| CX6g044595 | 6:23,857,525-23,860,720 | - | C1H6g03094 | C2H6g01763 | LOC_Os06g45390 | Os06g0664400 | - | Detail |
| CX6g045983 | 6:23,869,439-23,872,546 | + | C1H6g02505 | C2H6g14833 | LOC_Os06g45410 | Os06g0664800 | - | Detail |
| CX6g041356 | 6:23,878,910-23,882,185 | + | C1H6g15108 | C2H6g00067 | LOC_Os06g45430 | Os06g0665000 | - | Detail |
| CX6g041675 | 6:23,883,018-23,884,008 | - | C1H6g06152 | C2H6g17880 | LOC_Os06g45440 | Os06g0665100 | - | Detail |
| CX6g045958 | 6:23,885,882-23,887,129 | - | C1H6g22830 | C2H6g03277 | LOC_Os06g45450 | Os06g0665200 | - | Detail |
| CX6g044365 | 6:23,890,767-23,890,994 | + | - | - | - | - | - | Detail |
| CX6g045292 | 6:23,893,709-23,895,020 | - | C1H6g16253 | C2H6g02226 | LOC_Os06g45460 | Os06g0665400 | APO1, apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393 | Detail |
| CX6g045511 | 6:23,907,875-23,911,348 | + | C1H5g01573 | C2H7g04084 | - | - | - | Detail |
| CX6g042079 | 6:23,911,929-23,916,037 | - | C1H6g09339 | C2H6g26324 | LOC_Os06g45480 | Os06g0665500 | OsAAH | Detail |
| CX6g044663 | 6:23,917,228-23,917,467 | - | - | - | - | - | - | Detail |
| CX6g045639 | 6:23,924,922-23,930,954 | - | C1H6g29065 | C2H6g03492 | LOC_Os06g45500 | Os06g0665800 | HMA9, OsHMA9 ,oshma9-1, oshma9-2, HMA9 | Detail |