| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g28371 | 7:11,589,116-11,599,191 | + | C1H7g19127 | CX7g046916 | LOC_Os07g23944 | Os07g0421300 | - | Detail |
| C2H7g30615 | 7:11,606,819-11,609,054 | + | C1H7g23326 | CX7g046172 | LOC_Os07g23960 | Os07g0421600 | - | Detail |
| C2H7g15156 | 7:11,617,941-11,618,537 | + | - | CX7g050107 | LOC_Os07g23970 | Os07g0421800 | OsPAGN1 | Detail |
| C2H7g16555 | 7:11,635,363-11,652,409 | + | C1H7g21089 | CX7g048382 | LOC_Os07g23990 | Os07g0422000 | - | Detail |
| C2H7g20806 | 7:11,655,641-11,656,277 | + | C1H7g08151 | CX7g049305 | LOC_Os07g24000 | Os07g0422100 | - | Detail |
| C2H7g23963 | 7:11,710,308-11,711,051 | + | - | CX7g049533 | LOC_Os07g23640 | Os07g0418600 | OsRePRP2.2 | Detail |
| C2H7g06661 | 7:11,729,591-11,732,934 | + | C1H7g27736 | CX7g048142 | LOC_Os07g24050 | Os07g0422700 | - | Detail |
| C2H7g11380 | 7:11,739,266-11,740,492 | - | C1H7g20518 | CX7g049786 | LOC_Os07g24090 | Os07g0423000 | OsML1 | Detail |
| C2H7g20052 | 7:11,743,139-11,744,560 | + | C1H7g06060 | CX7g048527 | LOC_Os11g15010 | - | - | Detail |
| C2H7g20417 | 7:11,745,240-11,745,717 | - | C1H7g12910 | CX7g048166 | - | Os07g0103000 | - | Detail |
| C2H7g11256 | 7:11,793,234-11,798,931 | - | C1H7g00763 | CX7g048962 | LOC_Os07g24190 | Os07g0424400 | - | Detail |
| C2H7g20055 | 7:11,824,640-11,827,711 | - | C1H7g10096 | CX7g047181 | LOC_Os07g24230 | Os07g0425000 | - | Detail |
| C2H7g12121 | 7:11,894,314-11,894,910 | - | C1H7g11912 | CX7g047563 | LOC_Os07g25370 | Os07g0434300 | Os2R_MYB69 | Detail |
| C2H7g23918 | 7:11,905,710-11,906,318 | - | C1H7g28057 | CX7g047469 | LOC_Os07g25370 | Os07g0434300 | Os2R_MYB69 | Detail |
| C2H7g11299 | 7:11,909,758-11,916,458 | - | C1H7g21134 | CX7g048119 | LOC_Os07g25390 | Os07g0434500 | OsCHR736, CHR736 | Detail |
| C2H7g09063 | 7:11,924,778-11,927,160 | - | C1H7g14261 | CX7g048832 | LOC_Os07g25410 | Os07g0434700 | - | Detail |
| C2H7g08287 | 7:11,930,531-11,933,151 | - | C1H7g12803 | CX7g050052 | LOC_Os07g25420 | Os07g0435100 | OsRpn12 | Detail |
| C2H7g25536 | 7:11,936,437-11,937,109 | + | C1H7g24929 | CX7g048648 | LOC_Os07g25430 | Os07g0435300 | - | Detail |
| C2H7g18452 | 7:11,937,733-11,945,067 | - | C1H7g15359 | CX7g049540 | LOC_Os07g25440 | Os07g0435400 | - | Detail |
| C2H7g00516 | 7:11,970,397-11,976,862 | + | C1H7g27113 | CX7g048667 | LOC_Os07g25450 | Os07g0435900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041502 | 6:23,804,642-23,806,368 | - | C1H6g11988 | C2H6g13796 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| CX6g045945 | 6:23,808,222-23,809,256 | - | C1H6g24851 | C2H6g08478 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| CX6g044060 | 6:23,819,442-23,823,405 | + | C1H6g25709 | C2H6g14212 | LOC_Os06g45350 | Os06g0663900 | - | Detail |
| CX6g042626 | 6:23,823,877-23,824,206 | - | - | - | - | Os06g0664000 | - | Detail |
| CX6g045376 | 6:23,825,502-23,825,957 | + | C1H6g04386 | C2H6g28732 | - | - | - | Detail |
| CX6g042007 | 6:23,826,076-23,826,507 | + | - | C2H6g14654 | - | - | - | Detail |
| CX6g044758 | 6:23,827,727-23,835,630 | - | C1H6g08767 | C2H6g24826 | LOC_Os06g45360 | Os06g0664100 | - | Detail |
| CX6g042887 | 6:23,837,106-23,839,157 | - | C1H6g30945 | C2H6g00789 | LOC_Os06g45370 | Os06g0664200 | - | Detail |
| CX6g042503 | 6:23,849,987-23,856,303 | + | C1H6g08586 | C2H6g19748 | LOC_Os06g45380 | Os06g0664300 | OsVSR6 | Detail |
| CX6g044595 | 6:23,857,525-23,860,720 | - | C1H6g03094 | C2H6g01763 | LOC_Os06g45390 | Os06g0664400 | - | Detail |
| CX6g045983 | 6:23,869,439-23,872,546 | + | C1H6g02505 | C2H6g14833 | LOC_Os06g45410 | Os06g0664800 | - | Detail |
| CX6g041356 | 6:23,878,910-23,882,185 | + | C1H6g15108 | C2H6g00067 | LOC_Os06g45430 | Os06g0665000 | - | Detail |
| CX6g041675 | 6:23,883,018-23,884,008 | - | C1H6g06152 | C2H6g17880 | LOC_Os06g45440 | Os06g0665100 | - | Detail |
| CX6g045958 | 6:23,885,882-23,887,129 | - | C1H6g22830 | C2H6g03277 | LOC_Os06g45450 | Os06g0665200 | - | Detail |
| CX6g044365 | 6:23,890,767-23,890,994 | + | - | - | - | - | - | Detail |
| CX6g045292 | 6:23,893,709-23,895,020 | - | C1H6g16253 | C2H6g02226 | LOC_Os06g45460 | Os06g0665400 | APO1, apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393 | Detail |
| CX6g045511 | 6:23,907,875-23,911,348 | + | C1H5g01573 | C2H7g04084 | - | - | - | Detail |
| CX6g042079 | 6:23,911,929-23,916,037 | - | C1H6g09339 | C2H6g26324 | LOC_Os06g45480 | Os06g0665500 | OsAAH | Detail |
| CX6g044663 | 6:23,917,228-23,917,467 | - | - | - | - | - | - | Detail |
| CX6g045639 | 6:23,924,922-23,930,954 | - | C1H6g29065 | C2H6g03492 | LOC_Os06g45500 | Os06g0665800 | HMA9, OsHMA9 ,oshma9-1, oshma9-2, HMA9 | Detail |