| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g23814 | 5:15,200,594-15,202,600 | + | C2H5g15340 | CX5g040937 | LOC_Os05g32170 | Os05g0387700 | - | Detail |
| C1H5g18069 | 5:15,209,282-15,211,531 | - | C2H5g16678 | CX5g039837 | LOC_Os05g32180 | Os05g0387800 | - | Detail |
| C1H5g07636 | 5:15,217,262-15,219,529 | - | C2H5g20954 | CX5g041134 | LOC_Os05g32190 | Os05g0387900 | - | Detail |
| C1H5g04295 | 5:15,219,946-15,225,810 | - | C2H5g04124 | CX5g037831 | - | Os05g0388151 | - | Detail |
| C1H5g01058 | 5:15,224,764-15,234,208 | + | C2H5g24913 | CX5g040647 | LOC_Os05g32210 | Os05g0388400 | - | Detail |
| C1H5g02248 | 5:15,238,795-15,242,905 | + | C2H5g17569 | CX5g037221 | LOC_Os05g32220 | Os05g0388500 | - | Detail |
| C1H5g17467 | 5:15,251,814-15,257,289 | + | C2H5g24466 | CX5g040484 | LOC_Os05g32230 | Os05g0388600 | - | Detail |
| C1H5g21069 | 5:15,259,669-15,260,103 | - | - | - | - | - | - | Detail |
| C1H5g20766 | 5:15,278,499-15,282,586 | + | C2H5g28293 | CX5g040873 | LOC_Os05g32270 | Os05g0389000 | ERF142, OsERF#142, OsERF142, AP2/EREBP#049, AP2/EREBP49, SMOS1, OsSMOS1, SHB, OsAP2-EREBP-049, NGR5 | Detail |
| C1H5g02261 | 5:15,297,246-15,299,221 | - | C2H5g13580 | CX5g037113 | LOC_Os05g32310 | Os05g0389300 | - | Detail |
| C1H5g02591 | 5:15,302,156-15,305,132 | + | C2H5g20984 | CX5g038872 | LOC_Os05g32320 | Os05g0389400 | - | Detail |
| C1H5g03931 | 5:15,305,329-15,309,251 | - | C2H5g00884 | CX5g040346 | LOC_Os05g32330 | Os05g0389500 | - | Detail |
| C1H5g28425 | 5:15,318,034-15,322,563 | + | C2H5g20289 | CX5g041113 | LOC_Os05g32350 | Os05g0389600 | - | Detail |
| C1H5g01584 | 5:15,324,220-15,327,881 | + | C2H5g14052 | CX5g036712 | LOC_Os05g32360 | Os05g0389700 | - | Detail |
| C1H5g08791 | 5:15,328,161-15,331,631 | - | C2H5g22345 | CX5g040013 | LOC_Os05g32370 | Os05g0389800 | - | Detail |
| C1H5g14444 | 5:15,338,823-15,344,434 | - | C2H5g07557 | CX5g038787 | LOC_Os05g32380 | Os05g0390000 | - | Detail |
| C1H5g04632 | 5:15,348,218-15,357,040 | + | C2H5g06582 | CX5g037880 | LOC_Os05g32390 | Os05g0390100 | - | Detail |
| C1H5g17717 | 5:15,369,728-15,370,582 | + | C2H5g28202 | CX5g037525 | LOC_Os05g32420 | Os05g0390300 | - | Detail |
| C1H5g25353 | 5:15,378,397-15,383,367 | + | C2H5g02167 | CX5g038717 | LOC_Os05g32430 | Os05g0390500 | - | Detail |
| C1H5g07431 | 5:15,393,392-15,394,558 | - | C2H5g15789 | CX5g037050 | LOC_Os05g32440 | Os05g0390600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041502 | 6:23,804,642-23,806,368 | - | C1H6g11988 | C2H6g13796 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| CX6g045945 | 6:23,808,222-23,809,256 | - | C1H6g24851 | C2H6g08478 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| CX6g044060 | 6:23,819,442-23,823,405 | + | C1H6g25709 | C2H6g14212 | LOC_Os06g45350 | Os06g0663900 | - | Detail |
| CX6g042626 | 6:23,823,877-23,824,206 | - | - | - | - | Os06g0664000 | - | Detail |
| CX6g045376 | 6:23,825,502-23,825,957 | + | C1H6g04386 | C2H6g28732 | - | - | - | Detail |
| CX6g042007 | 6:23,826,076-23,826,507 | + | - | C2H6g14654 | - | - | - | Detail |
| CX6g044758 | 6:23,827,727-23,835,630 | - | C1H6g08767 | C2H6g24826 | LOC_Os06g45360 | Os06g0664100 | - | Detail |
| CX6g042887 | 6:23,837,106-23,839,157 | - | C1H6g30945 | C2H6g00789 | LOC_Os06g45370 | Os06g0664200 | - | Detail |
| CX6g042503 | 6:23,849,987-23,856,303 | + | C1H6g08586 | C2H6g19748 | LOC_Os06g45380 | Os06g0664300 | OsVSR6 | Detail |
| CX6g044595 | 6:23,857,525-23,860,720 | - | C1H6g03094 | C2H6g01763 | LOC_Os06g45390 | Os06g0664400 | - | Detail |
| CX6g045983 | 6:23,869,439-23,872,546 | + | C1H6g02505 | C2H6g14833 | LOC_Os06g45410 | Os06g0664800 | - | Detail |
| CX6g041356 | 6:23,878,910-23,882,185 | + | C1H6g15108 | C2H6g00067 | LOC_Os06g45430 | Os06g0665000 | - | Detail |
| CX6g041675 | 6:23,883,018-23,884,008 | - | C1H6g06152 | C2H6g17880 | LOC_Os06g45440 | Os06g0665100 | - | Detail |
| CX6g045958 | 6:23,885,882-23,887,129 | - | C1H6g22830 | C2H6g03277 | LOC_Os06g45450 | Os06g0665200 | - | Detail |
| CX6g044365 | 6:23,890,767-23,890,994 | + | - | - | - | - | - | Detail |
| CX6g045292 | 6:23,893,709-23,895,020 | - | C1H6g16253 | C2H6g02226 | LOC_Os06g45460 | Os06g0665400 | APO1, apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393 | Detail |
| CX6g045511 | 6:23,907,875-23,911,348 | + | C1H5g01573 | C2H7g04084 | - | - | - | Detail |
| CX6g042079 | 6:23,911,929-23,916,037 | - | C1H6g09339 | C2H6g26324 | LOC_Os06g45480 | Os06g0665500 | OsAAH | Detail |
| CX6g044663 | 6:23,917,228-23,917,467 | - | - | - | - | - | - | Detail |
| CX6g045639 | 6:23,924,922-23,930,954 | - | C1H6g29065 | C2H6g03492 | LOC_Os06g45500 | Os06g0665800 | HMA9, OsHMA9 ,oshma9-1, oshma9-2, HMA9 | Detail |