| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g03229 | 1:1,949,500-1,952,519 | - | C2H1g05668 | CX1g001789 | LOC_Os01g04990 | Os01g0143100 | - | Detail |
| C1H1g29677 | 1:1,955,387-1,956,097 | + | C2H1g12663 | CX1g006394 | LOC_Os01g05000 | Os01g0921800 | WCR1 | Detail |
| C1H1g02008 | 1:1,956,816-1,959,133 | - | C2H1g13945 | - | LOC_Os01g05010 | Os01g0143300 | - | Detail |
| C1H1g24343 | 1:1,960,741-1,963,203 | - | C2H1g15469 | CX1g006849 | LOC_Os01g05020 | Os01g0143400 | - | Detail |
| C1H1g07651 | 1:1,971,510-1,972,944 | - | C2H1g12519 | - | LOC_Os01g05050 | Os01g0143700 | - | Detail |
| C1H1g29985 | 1:1,973,656-1,975,598 | - | C2H1g06977 | - | LOC_Os01g05060 | Os01g0143800 | - | Detail |
| C1H1g10063 | 1:1,978,164-1,981,143 | - | C2H1g23660 | CX1g005129 | LOC_Os01g05070 | Os01g0144000 | - | Detail |
| C1H1g14146 | 1:1,982,269-1,983,997 | - | C2H1g10033 | CX1g005129 | LOC_Os01g05080 | Os01g0144100 | - | Detail |
| C1H1g07723 | 1:1,984,958-1,986,809 | + | C2H3g05697 | CX1g001193 | LOC_Os01g05090 | Os01g0144200 | - | Detail |
| C1H1g29569 | 1:1,987,462-1,988,924 | - | C2H1g12529 | CX1g000107 | LOC_Os01g05100 | Os01g0144300 | - | Detail |
| C1H1g20324 | 1:1,990,017-1,995,899 | - | C2H1g15155 | CX1g000964 | - | Os01g0144340 | - | Detail |
| C1H1g21842 | 1:1,999,608-2,001,545 | - | C2H1g26621 | CX1g006895 | LOC_Os01g05120 | Os01g0144500 | - | Detail |
| C1H1g24926 | 1:2,002,105-2,004,400 | + | C2H1g18449 | CX1g006746 | LOC_Os01g05130 | Os01g0144600 | - | Detail |
| C1H1g24429 | 1:2,005,279-2,006,527 | + | C2H1g12155 | CX1g003652 | LOC_Os01g05140 | Os01g0144700 | - | Detail |
| C1H1g29078 | 1:2,011,091-2,018,192 | + | C2H1g01902 | CX1g003888 | LOC_Os01g05170 | Os01g0145000 | - | Detail |
| C1H1g11669 | 1:2,033,416-2,033,751 | + | C2H1g27857 | CX1g003888 | LOC_Os01g05180 | Os01g0145200 | - | Detail |
| C1H1g02553 | 1:2,034,378-2,036,721 | + | - | - | LOC_Os01g05180 | Os01g0145200 | - | Detail |
| C1H1g18605 | 1:2,166,440-2,170,933 | + | C2H1g08018 | CX1g000323 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| C1H1g08705 | 1:2,172,134-2,175,521 | + | C2H1g25573 | CX1g001325 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| C1H1g07217 | 1:2,175,673-2,177,602 | - | C2H1g12465 | CX1g003030 | LOC_Os01g05440 | Os01g0147400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g041502 | 6:23,804,642-23,806,368 | - | C1H6g11988 | C2H6g13796 | LOC_Os06g45330 | Os06g0663600 | - | Detail |
| CX6g045945 | 6:23,808,222-23,809,256 | - | C1H6g24851 | C2H6g08478 | LOC_Os06g45340 | Os06g0663800 | - | Detail |
| CX6g044060 | 6:23,819,442-23,823,405 | + | C1H6g25709 | C2H6g14212 | LOC_Os06g45350 | Os06g0663900 | - | Detail |
| CX6g042626 | 6:23,823,877-23,824,206 | - | - | - | - | Os06g0664000 | - | Detail |
| CX6g045376 | 6:23,825,502-23,825,957 | + | C1H6g04386 | C2H6g28732 | - | - | - | Detail |
| CX6g042007 | 6:23,826,076-23,826,507 | + | - | C2H6g14654 | - | - | - | Detail |
| CX6g044758 | 6:23,827,727-23,835,630 | - | C1H6g08767 | C2H6g24826 | LOC_Os06g45360 | Os06g0664100 | - | Detail |
| CX6g042887 | 6:23,837,106-23,839,157 | - | C1H6g30945 | C2H6g00789 | LOC_Os06g45370 | Os06g0664200 | - | Detail |
| CX6g042503 | 6:23,849,987-23,856,303 | + | C1H6g08586 | C2H6g19748 | LOC_Os06g45380 | Os06g0664300 | OsVSR6 | Detail |
| CX6g044595 | 6:23,857,525-23,860,720 | - | C1H6g03094 | C2H6g01763 | LOC_Os06g45390 | Os06g0664400 | - | Detail |
| CX6g045983 | 6:23,869,439-23,872,546 | + | C1H6g02505 | C2H6g14833 | LOC_Os06g45410 | Os06g0664800 | - | Detail |
| CX6g041356 | 6:23,878,910-23,882,185 | + | C1H6g15108 | C2H6g00067 | LOC_Os06g45430 | Os06g0665000 | - | Detail |
| CX6g041675 | 6:23,883,018-23,884,008 | - | C1H6g06152 | C2H6g17880 | LOC_Os06g45440 | Os06g0665100 | - | Detail |
| CX6g045958 | 6:23,885,882-23,887,129 | - | C1H6g22830 | C2H6g03277 | LOC_Os06g45450 | Os06g0665200 | - | Detail |
| CX6g044365 | 6:23,890,767-23,890,994 | + | - | - | - | - | - | Detail |
| CX6g045292 | 6:23,893,709-23,895,020 | - | C1H6g16253 | C2H6g02226 | LOC_Os06g45460 | Os06g0665400 | APO1, apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393 | Detail |
| CX6g045511 | 6:23,907,875-23,911,348 | + | C1H5g01573 | C2H7g04084 | - | - | - | Detail |
| CX6g042079 | 6:23,911,929-23,916,037 | - | C1H6g09339 | C2H6g26324 | LOC_Os06g45480 | Os06g0665500 | OsAAH | Detail |
| CX6g044663 | 6:23,917,228-23,917,467 | - | - | - | - | - | - | Detail |
| CX6g045639 | 6:23,924,922-23,930,954 | - | C1H6g29065 | C2H6g03492 | LOC_Os06g45500 | Os06g0665800 | HMA9, OsHMA9 ,oshma9-1, oshma9-2, HMA9 | Detail |