| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17777 | 4:16,181,275-16,188,135 | + | C1H4g25893 | CX4g032050 | LOC_Os04g32020 | Os04g0390000 | - | Detail |
| C2H4g21035 | 4:16,193,715-16,196,639 | + | C1H4g28581 | CX4g035509 | LOC_Os04g32030 | Os04g0390100 | - | Detail |
| C2H4g12067 | 4:16,233,572-16,238,066 | + | C1H4g16304 | CX4g036446 | LOC_Os04g32050 | Os04g0390500 | - | Detail |
| C2H4g09335 | 4:16,239,602-16,244,198 | + | C1H4g23832 | CX4g035843 | LOC_Os04g32060 | Os04g0390600 | - | Detail |
| C2H4g06959 | 4:16,247,128-16,248,928 | + | C1H4g03957 | CX4g033273 | LOC_Os04g32070 | Os04g0390700 | - | Detail |
| C2H4g08791 | 4:16,249,806-16,251,867 | + | C1H4g22009 | CX4g035026 | LOC_Os04g32080 | Os04g0390800 | - | Detail |
| C2H4g28012 | 4:16,254,174-16,259,328 | - | C1H4g26683 | CX4g032317 | LOC_Os04g32090 | Os04g0391000 | - | Detail |
| C2H4g26928 | 4:16,279,033-16,281,173 | + | C1H4g07603 | CX4g031849 | LOC_Os04g32110 | Os04g0391500 | - | Detail |
| C2H4g15946 | 4:16,282,711-16,283,338 | - | - | - | - | - | - | Detail |
| C2H4g13680 | 4:16,283,474-16,283,707 | - | - | - | - | - | - | Detail |
| C2H4g25707 | 4:16,289,131-16,292,543 | + | C1H4g14710 | CX4g034277 | LOC_Os04g32150 | Os04g0391900 | - | Detail |
| C2H4g23776 | 4:16,297,410-16,298,636 | + | C1H4g04737 | - | LOC_Os04g32160 | Os04g0392500 | - | Detail |
| C2H4g20618 | 4:16,302,501-16,304,179 | + | C1H4g04737 | - | LOC_Os04g32190 | Os04g0392300 | - | Detail |
| C2H4g26332 | 4:16,309,283-16,311,082 | + | C1H4g04737 | - | LOC_Os04g32210 | Os04g0392500 | - | Detail |
| C2H4g27465 | 4:16,317,183-16,318,476 | + | - | - | - | - | - | Detail |
| C2H4g14869 | 4:16,328,342-16,329,193 | + | - | - | - | - | - | Detail |
| C2H4g13351 | 4:16,334,738-16,336,489 | + | C1H4g11686 | - | LOC_Os04g32250 | Os04g0393100 | - | Detail |
| C2H4g20464 | 4:16,339,013-16,340,315 | + | C1H4g20056 | - | LOC_Os04g32250 | Os04g0393100 | - | Detail |
| C2H4g11378 | 4:16,344,128-16,348,175 | - | C1H4g08605 | CX4g036058 | LOC_Os04g32270 | Os04g0393300 | - | Detail |
| C2H4g10960 | 4:16,372,978-16,378,254 | + | C1H4g12865 | CX4g034279 | LOC_Os04g32310 | Os04g0393900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043377 | 6:23,685,228-23,686,014 | - | C1H6g04237 | C2H6g19984 | LOC_Os11g14030 | - | - | Detail |
| CX6g042698 | 6:23,688,141-23,688,368 | - | C1H6g05211 | - | - | - | - | Detail |
| CX6g044438 | 6:23,688,508-23,692,129 | + | C1H6g27462 | C2H6g15814 | LOC_Os06g45050 | Os06g0661400 | - | Detail |
| CX6g043401 | 6:23,692,586-23,693,537 | - | C1H6g20860 | C2H6g03533 | LOC_Os06g45060 | Os06g0661500 | - | Detail |
| CX6g042755 | 6:23,693,969-23,694,181 | + | C1H6g12888 | - | LOC_Os06g45070 | Os06g0661600 | - | Detail |
| CX6g042847 | 6:23,696,499-23,700,444 | - | C1H6g10184 | C2H6g07549 | LOC_Os06g45080 | Os06g0661700 | - | Detail |
| CX6g044489 | 6:23,704,192-23,705,108 | + | C1H6g11026 | C2H6g01023 | LOC_Os06g45090 | Os06g0661766 | - | Detail |
| CX6g042632 | 6:23,705,836-23,709,035 | - | C1H6g25522 | C2H6g04346 | LOC_Os06g45100 | Os06g0661800 | - | Detail |
| CX6g045877 | 6:23,710,324-23,713,932 | - | C1H6g23408 | C2H6g29640 | LOC_Os06g45110 | Os06g0661900 | - | Detail |
| CX6g045100 | 6:23,716,626-23,722,701 | - | C1H6g23397 | C2H6g27870 | LOC_Os06g45120 | Os06g0662000 | PLS1, OsVHA-A, VHAA1, VHA-A1, OsPLS1, OsPLS1/VHA-A1 | Detail |
| CX6g043060 | 6:23,725,809-23,726,036 | + | - | - | - | - | - | Detail |
| CX6g043307 | 6:23,728,200-23,728,649 | - | - | - | - | - | - | Detail |
| CX6g043206 | 6:23,731,342-23,731,560 | + | - | - | - | - | - | Detail |
| CX6g043798 | 6:23,732,839-23,734,540 | - | C1H6g11972 | C2H6g29043 | LOC_Os06g45140 | Os06g0662200 | OsbZIP52, OsbZIP52/RISBZ5, RISBZ5 | Detail |
| CX6g045194 | 6:23,750,883-23,754,753 | - | C1H6g05313 | - | LOC_Os06g45190 | Os06g0662300 | - | Detail |
| CX6g043246 | 6:23,766,327-23,770,015 | - | C1H6g07836 | C2H6g07889 | LOC_Os06g45250 | Os06g0663100 | - | Detail |
| CX6g043895 | 6:23,771,213-23,776,124 | - | C1H6g25311 | C2H6g25016 | LOC_Os06g45280 | Os06g0663200 | - | Detail |
| CX6g045395 | 6:23,782,398-23,782,700 | + | - | - | - | - | - | Detail |
| CX6g044109 | 6:23,791,295-23,792,668 | + | C1H6g07255 | C2H6g04522 | LOC_Os06g45300 | Os06g0663400 | - | Detail |
| CX6g042273 | 6:23,794,222-23,797,593 | - | C1H6g04964 | C2H6g09171 | LOC_Os06g45310 | Os06g0663500 | - | Detail |