| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g05628 | 2:17,775,974-17,780,212 | + | C1H2g06236 | CX2g018935 | LOC_Os02g31070 | Os02g0515000 | - | Detail |
| C2H2g00412 | 2:17,786,987-17,792,901 | - | C1H2g28827 | CX2g023990 | LOC_Os02g31080 | Os02g0515200 | - | Detail |
| C2H2g20276 | 2:17,822,927-17,824,362 | - | C1H2g18050 | CX2g023720 | LOC_Os02g31100 | Os02g0515600 | - | Detail |
| C2H2g22827 | 2:17,826,171-17,826,428 | - | C1H2g17841 | CX2g023720 | LOC_Os02g31100 | Os02g0515600 | - | Detail |
| C2H2g22713 | 2:17,869,651-17,872,331 | - | C1H2g14621 | CX2g018953 | LOC_Os02g31140 | Os02g0516400 | CFL1 | Detail |
| C2H2g27355 | 2:17,879,442-17,885,428 | - | C1H2g25008 | CX2g022223 | LOC_Os02g31150 | Os02g0516600 | - | Detail |
| C2H2g15619 | 2:17,891,293-17,895,134 | - | C1H2g07996 | CX2g021699 | LOC_Os02g31160 | Os02g0516800 | - | Detail |
| C2H2g23348 | 2:17,907,907-17,908,188 | - | C1H2g06091 | CX2g023379 | - | - | - | Detail |
| C2H2g28412 | 2:17,908,716-17,909,305 | - | C1H2g31667 | - | - | - | - | Detail |
| C2H2g07464 | 2:17,923,776-17,930,527 | + | C1H2g24792 | CX2g019490 | LOC_Os02g31220 | Os02g0517300 | - | Detail |
| C2H2g15001 | 2:17,972,943-17,981,236 | + | C1H2g15770 | CX2g023271 | LOC_Os02g31290 | Os02g0517531 | - | Detail |
| C2H2g13964 | 2:17,989,724-17,994,038 | - | C1H2g21755 | CX2g023733 | LOC_Os02g32280 | Os02g0522700 | - | Detail |
| C2H2g30310 | 2:18,003,752-18,004,506 | - | C1H2g11106 | CX2g024433 | LOC_Os02g32200 | Os02g0521700 | - | Detail |
| C2H2g10717 | 2:18,005,797-18,009,367 | - | C1H2g08992 | CX2g023733 | LOC_Os02g32190 | Os02g0521600 | - | Detail |
| C2H2g04683 | 2:18,013,962-18,018,146 | - | C1H2g18001 | CX2g022455 | LOC_Os02g32180 | Os02g0521500 | - | Detail |
| C2H2g12935 | 2:18,020,343-18,027,132 | + | C1H2g31338 | CX2g023072 | LOC_Os02g32160 | Os02g0521300 | OsBON1 | Detail |
| C2H2g24508 | 2:18,035,329-18,036,705 | + | C1H2g24096 | CX2g018917 | LOC_Os02g32140 | Os02g0521100 | - | Detail |
| C2H2g06534 | 2:18,039,593-18,043,788 | + | C1H2g18885 | CX2g024178 | LOC_Os02g32120 | Os02g0520800 | - | Detail |
| C2H2g08579 | 2:18,048,656-18,051,931 | + | C1H2g21080 | CX2g024646 | LOC_Os02g32110 | Os02g0520750 | - | Detail |
| C2H2g05235 | 2:18,071,580-18,073,862 | + | C1H2g10881 | CX2g023239 | LOC_Os02g32060 | Os02g0520100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043377 | 6:23,685,228-23,686,014 | - | C1H6g04237 | C2H6g19984 | LOC_Os11g14030 | - | - | Detail |
| CX6g042698 | 6:23,688,141-23,688,368 | - | C1H6g05211 | - | - | - | - | Detail |
| CX6g044438 | 6:23,688,508-23,692,129 | + | C1H6g27462 | C2H6g15814 | LOC_Os06g45050 | Os06g0661400 | - | Detail |
| CX6g043401 | 6:23,692,586-23,693,537 | - | C1H6g20860 | C2H6g03533 | LOC_Os06g45060 | Os06g0661500 | - | Detail |
| CX6g042755 | 6:23,693,969-23,694,181 | + | C1H6g12888 | - | LOC_Os06g45070 | Os06g0661600 | - | Detail |
| CX6g042847 | 6:23,696,499-23,700,444 | - | C1H6g10184 | C2H6g07549 | LOC_Os06g45080 | Os06g0661700 | - | Detail |
| CX6g044489 | 6:23,704,192-23,705,108 | + | C1H6g11026 | C2H6g01023 | LOC_Os06g45090 | Os06g0661766 | - | Detail |
| CX6g042632 | 6:23,705,836-23,709,035 | - | C1H6g25522 | C2H6g04346 | LOC_Os06g45100 | Os06g0661800 | - | Detail |
| CX6g045877 | 6:23,710,324-23,713,932 | - | C1H6g23408 | C2H6g29640 | LOC_Os06g45110 | Os06g0661900 | - | Detail |
| CX6g045100 | 6:23,716,626-23,722,701 | - | C1H6g23397 | C2H6g27870 | LOC_Os06g45120 | Os06g0662000 | PLS1, OsVHA-A, VHAA1, VHA-A1, OsPLS1, OsPLS1/VHA-A1 | Detail |
| CX6g043060 | 6:23,725,809-23,726,036 | + | - | - | - | - | - | Detail |
| CX6g043307 | 6:23,728,200-23,728,649 | - | - | - | - | - | - | Detail |
| CX6g043206 | 6:23,731,342-23,731,560 | + | - | - | - | - | - | Detail |
| CX6g043798 | 6:23,732,839-23,734,540 | - | C1H6g11972 | C2H6g29043 | LOC_Os06g45140 | Os06g0662200 | OsbZIP52, OsbZIP52/RISBZ5, RISBZ5 | Detail |
| CX6g045194 | 6:23,750,883-23,754,753 | - | C1H6g05313 | - | LOC_Os06g45190 | Os06g0662300 | - | Detail |
| CX6g043246 | 6:23,766,327-23,770,015 | - | C1H6g07836 | C2H6g07889 | LOC_Os06g45250 | Os06g0663100 | - | Detail |
| CX6g043895 | 6:23,771,213-23,776,124 | - | C1H6g25311 | C2H6g25016 | LOC_Os06g45280 | Os06g0663200 | - | Detail |
| CX6g045395 | 6:23,782,398-23,782,700 | + | - | - | - | - | - | Detail |
| CX6g044109 | 6:23,791,295-23,792,668 | + | C1H6g07255 | C2H6g04522 | LOC_Os06g45300 | Os06g0663400 | - | Detail |
| CX6g042273 | 6:23,794,222-23,797,593 | - | C1H6g04964 | C2H6g09171 | LOC_Os06g45310 | Os06g0663500 | - | Detail |