| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g27324 | 3:4,445,035-4,445,583 | - | C2H3g13886 | CX3g025308 | LOC_Os03g10040 | Os03g0196500 | - | Detail |
| C1H3g20653 | 3:4,455,482-4,457,756 | + | C2H2g00568 | CX3g026659 | LOC_Os03g45810 | - | - | Detail |
| C1H3g10497 | 3:4,457,781-4,459,090 | + | - | CX3g026948 | LOC_Os05g14410 | - | - | Detail |
| C1H3g14076 | 3:4,473,222-4,474,169 | - | C2H3g29891 | CX3g026778 | LOC_Os03g10050 | Os03g0196600 | OsSAT2;2 | Detail |
| C1H3g06895 | 3:4,479,200-4,482,464 | - | C2H3g16863 | CX3g029849 | LOC_Os03g10060 | Os03g0196800 | - | Detail |
| C1H3g04009 | 3:4,483,148-4,491,479 | - | C2H3g14483 | CX3g025984 | LOC_Os03g10070 | Os03g0196900 | - | Detail |
| C1H3g00549 | 3:4,498,743-4,499,846 | - | C2H3g11161 | - | - | - | - | Detail |
| C1H3g21235 | 3:4,503,757-4,506,215 | + | C2H3g28460 | CX3g028614 | LOC_Os03g10090 | Os03g0197100 | OsPLT1 | Detail |
| C1H3g24518 | 3:4,511,918-4,513,307 | - | - | - | - | - | - | Detail |
| C1H3g09951 | 3:4,521,130-4,522,791 | + | C2H3g26739 | CX3g026156 | LOC_Os03g10100 | Os03g0197200 | OsPLT7 | Detail |
| C1H3g27125 | 3:4,524,686-4,526,960 | + | C2H3g12097 | CX3g027610 | LOC_Os03g10110 | Os03g0197300 | FLOC2 | Detail |
| C1H3g04901 | 3:4,527,464-4,532,740 | - | C2H3g26065 | CX3g029675 | LOC_Os03g10120 | Os03g0197400 | - | Detail |
| C1H3g09335 | 3:4,544,309-4,547,229 | + | C2H3g03055 | CX3g026551 | LOC_Os03g10140 | Os03g0197800 | - | Detail |
| C1H3g02056 | 3:4,551,114-4,554,979 | + | C2H3g07572 | CX3g029127 | - | Os03g0103000 | - | Detail |
| C1H3g04546 | 3:4,564,396-4,565,226 | - | C2H3g06372 | CX3g028648 | LOC_Os03g10150 | Os03g0197900 | - | Detail |
| C1H3g20431 | 3:4,571,978-4,576,974 | + | C2H3g11749 | CX3g028444 | LOC_Os03g10180 | Os03g0198300 | - | Detail |
| C1H3g23421 | 3:4,579,006-4,583,930 | - | C2H3g04323 | CX3g026265 | LOC_Os03g08400 | - | - | Detail |
| C1H3g03137 | 3:4,592,036-4,597,720 | - | C2H3g13794 | CX3g025719 | LOC_Os03g08400 | Os04g0357300 | - | Detail |
| C1H3g27623 | 3:4,598,551-4,601,943 | + | C2H3g19159 | CX3g030601 | LOC_Os03g10190 | Os03g0198400 | - | Detail |
| C1H3g02850 | 3:4,607,914-4,610,236 | + | C2H3g09921 | CX3g031306 | LOC_Os03g10200 | Os03g0198500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g043377 | 6:23,685,228-23,686,014 | - | C1H6g04237 | C2H6g19984 | LOC_Os11g14030 | - | - | Detail |
| CX6g042698 | 6:23,688,141-23,688,368 | - | C1H6g05211 | - | - | - | - | Detail |
| CX6g044438 | 6:23,688,508-23,692,129 | + | C1H6g27462 | C2H6g15814 | LOC_Os06g45050 | Os06g0661400 | - | Detail |
| CX6g043401 | 6:23,692,586-23,693,537 | - | C1H6g20860 | C2H6g03533 | LOC_Os06g45060 | Os06g0661500 | - | Detail |
| CX6g042755 | 6:23,693,969-23,694,181 | + | C1H6g12888 | - | LOC_Os06g45070 | Os06g0661600 | - | Detail |
| CX6g042847 | 6:23,696,499-23,700,444 | - | C1H6g10184 | C2H6g07549 | LOC_Os06g45080 | Os06g0661700 | - | Detail |
| CX6g044489 | 6:23,704,192-23,705,108 | + | C1H6g11026 | C2H6g01023 | LOC_Os06g45090 | Os06g0661766 | - | Detail |
| CX6g042632 | 6:23,705,836-23,709,035 | - | C1H6g25522 | C2H6g04346 | LOC_Os06g45100 | Os06g0661800 | - | Detail |
| CX6g045877 | 6:23,710,324-23,713,932 | - | C1H6g23408 | C2H6g29640 | LOC_Os06g45110 | Os06g0661900 | - | Detail |
| CX6g045100 | 6:23,716,626-23,722,701 | - | C1H6g23397 | C2H6g27870 | LOC_Os06g45120 | Os06g0662000 | PLS1, OsVHA-A, VHAA1, VHA-A1, OsPLS1, OsPLS1/VHA-A1 | Detail |
| CX6g043060 | 6:23,725,809-23,726,036 | + | - | - | - | - | - | Detail |
| CX6g043307 | 6:23,728,200-23,728,649 | - | - | - | - | - | - | Detail |
| CX6g043206 | 6:23,731,342-23,731,560 | + | - | - | - | - | - | Detail |
| CX6g043798 | 6:23,732,839-23,734,540 | - | C1H6g11972 | C2H6g29043 | LOC_Os06g45140 | Os06g0662200 | OsbZIP52, OsbZIP52/RISBZ5, RISBZ5 | Detail |
| CX6g045194 | 6:23,750,883-23,754,753 | - | C1H6g05313 | - | LOC_Os06g45190 | Os06g0662300 | - | Detail |
| CX6g043246 | 6:23,766,327-23,770,015 | - | C1H6g07836 | C2H6g07889 | LOC_Os06g45250 | Os06g0663100 | - | Detail |
| CX6g043895 | 6:23,771,213-23,776,124 | - | C1H6g25311 | C2H6g25016 | LOC_Os06g45280 | Os06g0663200 | - | Detail |
| CX6g045395 | 6:23,782,398-23,782,700 | + | - | - | - | - | - | Detail |
| CX6g044109 | 6:23,791,295-23,792,668 | + | C1H6g07255 | C2H6g04522 | LOC_Os06g45300 | Os06g0663400 | - | Detail |
| CX6g042273 | 6:23,794,222-23,797,593 | - | C1H6g04964 | C2H6g09171 | LOC_Os06g45310 | Os06g0663500 | - | Detail |