| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20105 | 4:6,705,266-6,705,853 | + | - | - | - | - | - | Detail |
| C2H4g20550 | 4:6,707,768-6,709,158 | + | C1H4g30629 | CX4g035112 | LOC_Os04g13140 | Os04g0208200 | - | Detail |
| C2H4g17798 | 4:6,710,843-6,712,726 | - | C1H4g15636 | CX4g033448 | LOC_Os04g13150 | Os04g0208400 | BRT1, OsFBX125 | Detail |
| C2H4g01739 | 4:6,716,088-6,717,840 | - | C1H4g07664 | CX4g032433 | LOC_Os04g13160 | Os04g0208500 | - | Detail |
| C2H4g10339 | 4:6,720,625-6,722,435 | - | C1H4g06544 | CX4g035372 | LOC_Os04g13170 | Os04g0208600 | - | Detail |
| C2H4g00571 | 4:6,758,074-6,769,349 | - | C1H4g10533 | CX4g033845 | LOC_Os04g13210 | Os04g0209200 | OsABCC9 | Detail |
| C2H4g15555 | 4:6,777,720-6,785,840 | - | C1H4g24328 | CX4g033865 | LOC_Os04g13220 | Os04g0209300 | - | Detail |
| C2H4g02817 | 4:6,812,996-6,816,312 | + | - | - | LOC_Os04g13260 | - | - | Detail |
| C2H4g04516 | 4:6,832,978-6,833,205 | + | C1H4g07264 | - | - | - | - | Detail |
| C2H4g06684 | 4:6,872,076-6,875,130 | + | C1H4g15372 | CX4g033836 | LOC_Os04g13364 | Os04g0210700 | - | Detail |
| C2H4g07997 | 4:6,903,171-6,904,403 | - | C1H4g21611 | CX4g034363 | LOC_Os04g13460 | Os04g0211900 | - | Detail |
| C2H4g28740 | 4:6,914,362-6,928,209 | + | C1H4g12804 | CX4g033200 | LOC_Os04g13470 | Os04g0212200 | - | Detail |
| C2H4g27029 | 4:6,931,932-6,932,470 | + | C1H4g25525 | CX4g033217 | LOC_Os04g13480 | Os04g0212450 | - | Detail |
| C2H4g27586 | 4:6,978,065-6,979,670 | + | C1H4g04473 | CX4g031980 | LOC_Os04g13530 | Os04g0212700 | - | Detail |
| C2H4g09067 | 4:7,034,258-7,036,783 | + | C1H4g27274 | CX4g035833 | LOC_Os04g13590 | Os04g0152400 | - | Detail |
| C2H4g24663 | 4:7,159,216-7,159,786 | + | - | CX4g033913 | - | Os04g0217500 | - | Detail |
| C2H4g12846 | 4:7,166,902-7,231,033 | + | C1H4g24799 | CX4g036380 | LOC_Os04g14130 | Os04g0218100 | - | Detail |
| C2H4g05575 | 4:7,186,077-7,192,112 | - | C1H4g17468 | CX4g033439 | LOC_Os04g14190 | Os04g0218900 | - | Detail |
| C2H4g11659 | 4:7,248,263-7,252,104 | - | - | CX4g035219 | LOC_Os04g12730 | Os04g0272500 | - | Detail |
| C2H4g23433 | 4:7,272,898-7,282,635 | + | C1H4g15248 | CX4g032084 | LOC_Os04g14304 | Os04g0220300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042487 | 6:22,990,846-22,992,633 | + | C1H6g00877 | C2H6g29125 | LOC_Os06g43900 | Os06g0647100 | - | Detail |
| CX6g041230 | 6:22,998,707-23,003,011 | + | C1H6g08065 | C2H6g13204 | LOC_Os06g43910 | Os06g0647200 | ORR5, ORR5, Orr5, OsRR25, Rrb3, OsRR21, OsRRB3 | Detail |
| CX6g041258 | 6:23,003,775-23,008,889 | - | C1H6g31723 | C2H6g09236 | LOC_Os06g43930 | Os06g0647400 | - | Detail |
| CX6g044812 | 6:23,017,277-23,017,543 | - | C1H6g23128 | - | - | - | - | Detail |
| CX6g043868 | 6:23,039,223-23,040,449 | - | C1H6g19263 | C2H6g29946 | LOC_Os06g43980 | Os06g0648200 | - | Detail |
| CX6g041862 | 6:23,044,434-23,045,809 | - | C1H6g04314 | C2H6g15797 | LOC_Os06g43990 | Os06g0648500 | - | Detail |
| CX6g043038 | 6:23,052,475-23,052,624 | + | - | - | - | - | - | Detail |
| CX6g045081 | 6:23,054,497-23,054,706 | - | - | - | - | - | - | Detail |
| CX6g043505 | 6:23,055,394-23,056,164 | + | C1H6g02827 | C2H6g19123 | - | - | - | Detail |
| CX6g041428 | 6:23,065,114-23,066,507 | - | C1H6g19092 | C2H6g25130 | LOC_Os06g44010 | Os06g0649000 | WRKY28, WRKY GENE 28 | Detail |
| CX6g042578 | 6:23,081,947-23,090,403 | + | C1H6g01999 | C2H6g09048 | LOC_Os06g44030 | Os06g0649500 | - | Detail |
| CX6g041592 | 6:23,117,048-23,119,690 | + | C1H6g07514 | C2H6g02564 | LOC_Os06g44040 | Os06g0649700 | - | Detail |
| CX6g042762 | 6:23,123,713-23,126,165 | - | C1H6g08177 | C2H6g25962 | LOC_Os06g44050 | Os06g0649800 | Sdt97 | Detail |
| CX6g041956 | 6:23,130,055-23,134,035 | - | C1H6g22257 | C2H6g16416 | LOC_Os06g44060 | Os06g0649900 | spPLD | Detail |
| CX6g043680 | 6:23,142,384-23,143,930 | - | C1H6g30281 | C2H6g28806 | LOC_Os06g44100 | Os06g0650300 | OsglHAT1, GW6a | Detail |
| CX6g044339 | 6:23,172,421-23,175,009 | + | C1H6g16619 | C2H6g05378 | LOC_Os06g44140 | Os06g0650600 | - | Detail |
| CX6g044335 | 6:23,175,467-23,175,685 | - | C1H6g04732 | - | - | Os06g0650700 | - | Detail |
| CX6g044394 | 6:23,176,478-23,180,079 | - | C1H6g14399 | C2H6g07245 | LOC_Os06g44150 | Os06g0650800 | - | Detail |
| CX6g042335 | 6:23,183,430-23,184,219 | - | C1H6g21554 | C2H6g27011 | LOC_Os06g44160 | Os06g0650900 | - | Detail |
| CX6g042387 | 6:23,187,771-23,189,713 | - | C1H6g11864 | C2H6g19028 | LOC_Os06g44180 | Os06g0651000 | - | Detail |