| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g30538 | 1:16,456,028-16,467,196 | - | C2H1g03710 | CX1g001585 | LOC_Os01g31870 | Os01g0503400 | - | Detail |
| C1H1g06595 | 1:16,477,110-16,477,778 | + | C2H1g08008 | CX1g001150 | LOC_Os01g31920 | - | - | Detail |
| C1H1g12333 | 1:16,479,197-16,479,628 | - | C2H9g13872 | - | - | - | - | Detail |
| C1H1g25872 | 1:16,480,660-16,481,204 | + | C2H9g20689 | - | - | - | - | Detail |
| C1H1g11996 | 1:16,503,989-16,507,268 | - | C2H1g18628 | CX1g004806 | LOC_Os01g31940 | Os01g0504100 | - | Detail |
| C1H1g05311 | 1:16,510,472-16,511,270 | + | - | - | - | - | - | Detail |
| C1H1g01852 | 1:16,519,040-16,526,046 | - | C2H1g11121 | CX1g003197 | LOC_Os01g31980 | Os01g0684900 | - | Detail |
| C1H1g02771 | 1:16,553,870-16,557,896 | + | C2H1g17778 | CX1g001358 | LOC_Os01g32080 | Os01g0505400 | - | Detail |
| C1H1g20702 | 1:16,567,110-16,569,399 | + | C2H1g04751 | CX1g000996 | LOC_Os01g32130 | Os01g0505700 | - | Detail |
| C1H1g23126 | 1:16,589,478-16,591,841 | + | C2H1g26570 | CX1g005476 | LOC_Os01g32170 | Os01g0506100 | OsSOAR1 | Detail |
| C1H1g02660 | 1:16,596,599-16,611,317 | - | C2H1g29800 | CX1g005140 | LOC_Os01g32184 | Os01g0506200 | - | Detail |
| C1H1g24508 | 1:16,617,880-16,620,904 | - | - | - | - | - | - | Detail |
| C1H1g06160 | 1:16,633,701-16,637,014 | + | C2H1g17425 | CX1g003158 | LOC_Os01g32259 | - | - | Detail |
| C1H1g14708 | 1:16,669,768-16,673,080 | + | C2H1g20888 | CX1g001329 | LOC_Os01g32280 | Os01g0507300 | - | Detail |
| C1H1g29043 | 1:16,676,141-16,680,745 | + | C2H1g26772 | CX1g002600 | LOC_Os01g32300 | Os01g0507500 | - | Detail |
| C1H1g19941 | 1:16,709,523-16,710,147 | + | C2H1g17560 | CX1g003291 | LOC_Os01g32330 | Os01g0507700 | - | Detail |
| C1H1g02444 | 1:16,714,729-16,720,426 | + | C2H1g02648 | CX1g000173 | LOC_Os01g32350 | Os01g0507900 | - | Detail |
| C1H1g29270 | 1:16,723,845-16,732,601 | + | C2H1g18654 | CX1g003736 | LOC_Os01g32364 | Os01g0508000 | - | Detail |
| C1H1g14681 | 1:16,782,827-16,784,752 | + | C2H1g13741 | CX1g003494 | - | - | - | Detail |
| C1H1g15462 | 1:16,850,963-16,854,160 | + | C2H1g19341 | CX1g001437 | LOC_Os01g32640 | Os01g0509900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042487 | 6:22,990,846-22,992,633 | + | C1H6g00877 | C2H6g29125 | LOC_Os06g43900 | Os06g0647100 | - | Detail |
| CX6g041230 | 6:22,998,707-23,003,011 | + | C1H6g08065 | C2H6g13204 | LOC_Os06g43910 | Os06g0647200 | ORR5, ORR5, Orr5, OsRR25, Rrb3, OsRR21, OsRRB3 | Detail |
| CX6g041258 | 6:23,003,775-23,008,889 | - | C1H6g31723 | C2H6g09236 | LOC_Os06g43930 | Os06g0647400 | - | Detail |
| CX6g044812 | 6:23,017,277-23,017,543 | - | C1H6g23128 | - | - | - | - | Detail |
| CX6g043868 | 6:23,039,223-23,040,449 | - | C1H6g19263 | C2H6g29946 | LOC_Os06g43980 | Os06g0648200 | - | Detail |
| CX6g041862 | 6:23,044,434-23,045,809 | - | C1H6g04314 | C2H6g15797 | LOC_Os06g43990 | Os06g0648500 | - | Detail |
| CX6g043038 | 6:23,052,475-23,052,624 | + | - | - | - | - | - | Detail |
| CX6g045081 | 6:23,054,497-23,054,706 | - | - | - | - | - | - | Detail |
| CX6g043505 | 6:23,055,394-23,056,164 | + | C1H6g02827 | C2H6g19123 | - | - | - | Detail |
| CX6g041428 | 6:23,065,114-23,066,507 | - | C1H6g19092 | C2H6g25130 | LOC_Os06g44010 | Os06g0649000 | WRKY28, WRKY GENE 28 | Detail |
| CX6g042578 | 6:23,081,947-23,090,403 | + | C1H6g01999 | C2H6g09048 | LOC_Os06g44030 | Os06g0649500 | - | Detail |
| CX6g041592 | 6:23,117,048-23,119,690 | + | C1H6g07514 | C2H6g02564 | LOC_Os06g44040 | Os06g0649700 | - | Detail |
| CX6g042762 | 6:23,123,713-23,126,165 | - | C1H6g08177 | C2H6g25962 | LOC_Os06g44050 | Os06g0649800 | Sdt97 | Detail |
| CX6g041956 | 6:23,130,055-23,134,035 | - | C1H6g22257 | C2H6g16416 | LOC_Os06g44060 | Os06g0649900 | spPLD | Detail |
| CX6g043680 | 6:23,142,384-23,143,930 | - | C1H6g30281 | C2H6g28806 | LOC_Os06g44100 | Os06g0650300 | OsglHAT1, GW6a | Detail |
| CX6g044339 | 6:23,172,421-23,175,009 | + | C1H6g16619 | C2H6g05378 | LOC_Os06g44140 | Os06g0650600 | - | Detail |
| CX6g044335 | 6:23,175,467-23,175,685 | - | C1H6g04732 | - | - | Os06g0650700 | - | Detail |
| CX6g044394 | 6:23,176,478-23,180,079 | - | C1H6g14399 | C2H6g07245 | LOC_Os06g44150 | Os06g0650800 | - | Detail |
| CX6g042335 | 6:23,183,430-23,184,219 | - | C1H6g21554 | C2H6g27011 | LOC_Os06g44160 | Os06g0650900 | - | Detail |
| CX6g042387 | 6:23,187,771-23,189,713 | - | C1H6g11864 | C2H6g19028 | LOC_Os06g44180 | Os06g0651000 | - | Detail |