| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28307 | 9:18,089,729-18,090,154 | - | C2H9g30658 | - | LOC_Os09g37470 | Os09g0546100 | OsSAUR45, SAUR45 | Detail |
| C1H9g13292 | 9:18,092,597-18,093,031 | + | C2H9g28262 | - | LOC_Os09g37460 | Os09g0546700 | - | Detail |
| C1H9g07247 | 9:18,094,765-18,095,223 | + | C2H9g06948 | - | LOC_Os09g37500 | Os09g0547100 | - | Detail |
| C1H9g03915 | 9:18,095,780-18,098,387 | - | C2H9g26899 | CX9g057441 | LOC_Os09g37510 | Os09g0547200 | - | Detail |
| C1H9g15355 | 9:18,119,229-18,125,137 | + | C2H9g03178 | CX9g056795 | LOC_Os09g37520 | Os09g0547300 | - | Detail |
| C1H9g27743 | 9:18,137,081-18,138,705 | + | C2H9g17799 | CX9g054942 | LOC_Os09g37540 | Os09g0547500 | LOGL9 | Detail |
| C1H9g22751 | 9:18,146,528-18,148,024 | + | C2H9g20616 | CX9g055014 | LOC_Os09g37570 | Os09g0547800 | - | Detail |
| C1H9g10886 | 9:18,148,948-18,157,363 | + | C2H9g03194 | CX9g055014 | LOC_Os09g37580 | Os09g0547900 | - | Detail |
| C1H9g26807 | 9:18,161,433-18,163,126 | + | C2H9g25660 | CX9g055014 | LOC_Os09g37590 | Os09g0548066 | - | Detail |
| C1H9g12329 | 9:18,163,642-18,167,330 | + | C2H9g22088 | CX9g058170 | LOC_Os09g37590 | Os09g0548100 | - | Detail |
| C1H9g18410 | 9:18,171,069-18,173,919 | + | C2H9g30052 | CX9g056357 | LOC_Os09g37600 | Os09g0548200 | - | Detail |
| C1H9g24811 | 9:18,175,011-18,178,616 | + | C2H9g14355 | CX9g055652 | LOC_Os09g37610 | Os09g0548300 | - | Detail |
| C1H9g07737 | 9:18,180,657-18,182,305 | - | C2H9g00853 | CX9g055964 | LOC_Os09g37620 | Os09g0548400 | - | Detail |
| C1H9g18904 | 9:18,185,309-18,186,373 | + | C2H9g19961 | CX9g055960 | LOC_Os09g37640 | Os09g0548600 | - | Detail |
| C1H9g05052 | 9:18,186,665-18,189,558 | - | C2H9g10997 | CX9g055964 | LOC_Os09g37650 | Os09g0548700 | - | Detail |
| C1H9g28634 | 9:18,189,981-18,190,316 | + | C2H9g07332 | - | - | - | - | Detail |
| C1H9g31557 | 9:18,191,792-18,192,130 | - | C2H9g13661 | - | - | - | - | Detail |
| C1H9g02279 | 9:18,207,579-18,211,248 | - | C2H9g30567 | CX9g058080 | LOC_Os09g37690 | Os09g0549300 | - | Detail |
| C1H9g28309 | 9:18,214,590-18,216,184 | + | C2H9g13697 | CX9g055037 | LOC_Os09g37700 | Os09g0549400 | - | Detail |
| C1H9g00407 | 9:18,220,924-18,225,921 | + | C2H9g27020 | CX9g055826 | LOC_Os09g37710 | Os09g0549450 | OsNLP4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g042487 | 6:22,990,846-22,992,633 | + | C1H6g00877 | C2H6g29125 | LOC_Os06g43900 | Os06g0647100 | - | Detail |
| CX6g041230 | 6:22,998,707-23,003,011 | + | C1H6g08065 | C2H6g13204 | LOC_Os06g43910 | Os06g0647200 | ORR5, ORR5, Orr5, OsRR25, Rrb3, OsRR21, OsRRB3 | Detail |
| CX6g041258 | 6:23,003,775-23,008,889 | - | C1H6g31723 | C2H6g09236 | LOC_Os06g43930 | Os06g0647400 | - | Detail |
| CX6g044812 | 6:23,017,277-23,017,543 | - | C1H6g23128 | - | - | - | - | Detail |
| CX6g043868 | 6:23,039,223-23,040,449 | - | C1H6g19263 | C2H6g29946 | LOC_Os06g43980 | Os06g0648200 | - | Detail |
| CX6g041862 | 6:23,044,434-23,045,809 | - | C1H6g04314 | C2H6g15797 | LOC_Os06g43990 | Os06g0648500 | - | Detail |
| CX6g043038 | 6:23,052,475-23,052,624 | + | - | - | - | - | - | Detail |
| CX6g045081 | 6:23,054,497-23,054,706 | - | - | - | - | - | - | Detail |
| CX6g043505 | 6:23,055,394-23,056,164 | + | C1H6g02827 | C2H6g19123 | - | - | - | Detail |
| CX6g041428 | 6:23,065,114-23,066,507 | - | C1H6g19092 | C2H6g25130 | LOC_Os06g44010 | Os06g0649000 | WRKY28, WRKY GENE 28 | Detail |
| CX6g042578 | 6:23,081,947-23,090,403 | + | C1H6g01999 | C2H6g09048 | LOC_Os06g44030 | Os06g0649500 | - | Detail |
| CX6g041592 | 6:23,117,048-23,119,690 | + | C1H6g07514 | C2H6g02564 | LOC_Os06g44040 | Os06g0649700 | - | Detail |
| CX6g042762 | 6:23,123,713-23,126,165 | - | C1H6g08177 | C2H6g25962 | LOC_Os06g44050 | Os06g0649800 | Sdt97 | Detail |
| CX6g041956 | 6:23,130,055-23,134,035 | - | C1H6g22257 | C2H6g16416 | LOC_Os06g44060 | Os06g0649900 | spPLD | Detail |
| CX6g043680 | 6:23,142,384-23,143,930 | - | C1H6g30281 | C2H6g28806 | LOC_Os06g44100 | Os06g0650300 | OsglHAT1, GW6a | Detail |
| CX6g044339 | 6:23,172,421-23,175,009 | + | C1H6g16619 | C2H6g05378 | LOC_Os06g44140 | Os06g0650600 | - | Detail |
| CX6g044335 | 6:23,175,467-23,175,685 | - | C1H6g04732 | - | - | Os06g0650700 | - | Detail |
| CX6g044394 | 6:23,176,478-23,180,079 | - | C1H6g14399 | C2H6g07245 | LOC_Os06g44150 | Os06g0650800 | - | Detail |
| CX6g042335 | 6:23,183,430-23,184,219 | - | C1H6g21554 | C2H6g27011 | LOC_Os06g44160 | Os06g0650900 | - | Detail |
| CX6g042387 | 6:23,187,771-23,189,713 | - | C1H6g11864 | C2H6g19028 | LOC_Os06g44180 | Os06g0651000 | - | Detail |