| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g30515 | 11:13,000,028-13,000,342 | - | C1H11g20213 | - | - | - | - | Detail |
| C2H11g30379 | 11:13,023,388-13,024,785 | - | C1H11g31810 | CX11g011037 | LOC_Os11g25510 | Os11g0441900 | OsRLCK326 | Detail |
| C2H11g19315 | 11:13,031,075-13,031,587 | + | C1H11g09866 | CX11g011666 | LOC_Os11g25454 | Os11g0441500 | - | Detail |
| C2H11g19618 | 11:13,036,079-13,037,602 | + | C1H11g02200 | CX11g011666 | LOC_Os11g25454 | Os11g0441500 | - | Detail |
| C2H11g21927 | 11:13,050,336-13,051,405 | + | C1H11g29057 | CX11g014609 | LOC_Os11g25440 | Os11g0440422 | - | Detail |
| C2H11g15961 | 11:13,102,431-13,108,914 | + | C1H11g25006 | CX11g014987 | LOC_Os11g25330 | Os11g0440200 | - | Detail |
| C2H11g25324 | 11:13,126,348-13,132,180 | - | C1H11g30108 | CX11g013855 | LOC_Os11g25230 | Os11g0443700 | - | Detail |
| C2H11g03192 | 11:13,132,219-13,132,677 | - | C1H11g21262 | CX11g013855 | LOC_Os11g25700 | Os11g0443700 | - | Detail |
| C2H11g07950 | 11:13,175,115-13,181,402 | - | C1H11g05188 | CX11g012957 | LOC_Os11g25230 | Os11g0438700 | - | Detail |
| C2H11g16214 | 11:13,195,447-13,198,321 | - | C1H11g12913 | CX11g012957 | LOC_Os11g25700 | Os11g0443700 | - | Detail |
| C2H11g07005 | 11:13,230,764-13,231,786 | + | C1H11g04749 | CX11g011904 | LOC_Os11g25780 | Os11g0444700 | - | Detail |
| C2H11g06487 | 11:13,250,852-13,251,625 | + | C1H11g19485 | CX11g013403 | LOC_Os11g25780 | Os11g0444700 | - | Detail |
| C2H11g02987 | 11:13,259,484-13,262,347 | - | C1H11g28391 | - | - | - | - | Detail |
| C2H11g27394 | 11:13,270,424-13,270,829 | + | C1H11g31601 | - | - | - | - | Detail |
| C2H11g29847 | 11:13,308,123-13,312,186 | + | C1H11g10558 | CX11g011625 | LOC_Os11g25920 | Os11g0446000 | RSS3 | Detail |
| C2H11g23151 | 11:13,331,834-13,351,845 | + | C1H11g07790 | CX11g013991 | LOC_Os11g25980 | Os11g0446500 | - | Detail |
| C2H11g07636 | 11:13,405,269-13,409,277 | - | C1H11g09251 | CX11g013291 | - | - | - | Detail |
| C2H11g29907 | 11:13,410,322-13,410,668 | + | C1H11g30298 | - | - | - | - | Detail |
| C2H11g20908 | 11:13,415,442-13,422,489 | + | C1H11g14144 | CX11g012501 | LOC_Os11g26030 | Os11g0447300 | - | Detail |
| C2H11g17659 | 11:13,454,166-13,461,818 | + | C1H11g04234 | CX11g012981 | LOC_Os11g26130 | Os11g0448000 | OsWSS1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005047 | 1:2,072,547-2,072,876 | - | C1H1g12945 | C2H1g20272 | LOC_Os01g06520 | Os01g0149700 | KINt1 | Detail |
| CX1g003624 | 1:2,078,822-2,079,019 | - | - | C2H1g14098 | - | - | - | Detail |
| CX1g000648 | 1:2,082,745-2,084,171 | - | - | - | - | - | - | Detail |
| CX1g003888 | 1:2,106,381-2,106,950 | + | C1H1g29078 | C2H1g24298 | LOC_Os01g05250 | Os01g0146200 | - | Detail |
| CX1g000323 | 1:2,166,179-2,170,094 | + | C1H1g18605 | C2H1g08018 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| CX1g005533 | 1:2,171,659-2,172,408 | - | - | - | - | Os01g0147250 | - | Detail |
| CX1g001325 | 1:2,171,941-2,174,602 | + | C1H1g08705 | C2H1g25573 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| CX1g006491 | 1:2,180,893-2,181,051 | + | - | - | - | - | - | Detail |
| CX1g003030 | 1:2,191,343-2,194,905 | - | C1H1g11928 | C2H1g25353 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| CX1g005120 | 1:2,202,349-2,205,877 | - | C1H1g17304 | C2H1g29480 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| CX1g006525 | 1:2,207,260-2,210,546 | - | C1H1g08404 | C2H1g30066 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| CX1g001423 | 1:2,216,430-2,228,307 | + | C1H1g03903 | C2H1g25150 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| CX1g005368 | 1:2,238,442-2,242,036 | - | - | C2H1g10498 | LOC_Os01g05620 | Os01g0149500 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59 | Detail |
| CX1g005739 | 1:2,243,300-2,243,761 | + | C1H1g09766 | C2H1g18971 | LOC_Os01g05630 | Os01g0149600 | H2B | Detail |
| CX1g006643 | 1:2,245,123-2,248,470 | - | C1H1g01144 | C2H1g06791 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| CX1g006502 | 1:2,256,318-2,260,166 | - | C1H1g17924 | C2H1g25044 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| CX1g002286 | 1:2,265,565-2,268,998 | - | C1H1g30008 | C2H1g00511 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| CX1g004862 | 1:2,269,565-2,270,509 | - | - | - | - | - | - | Detail |
| CX1g000079 | 1:2,271,984-2,274,513 | + | C1H1g15806 | C2H1g17834 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| CX1g000733 | 1:2,305,907-2,307,621 | + | - | C2H1g16876 | LOC_Os01g05790 | Os01g0151100 | - | Detail |