| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g10533 | 1:31,353,773-31,355,242 | - | C1H1g07860 | CX1g007244 | LOC_Os01g61200 | Os01g0827700 | - | Detail |
| C2H1g13011 | 1:31,358,221-31,358,841 | + | C1H1g02301 | CX1g001942 | LOC_Os01g61210 | Os01g0827800 | - | Detail |
| C2H1g00363 | 1:31,367,417-31,369,396 | + | C1H1g04351 | CX1g000526 | LOC_Os01g61230 | Os01g0828100 | - | Detail |
| C2H1g02486 | 1:31,370,309-31,372,252 | + | C1H1g01848 | CX1g005049 | LOC_Os01g61240 | Os01g0828200 | - | Detail |
| C2H1g25148 | 1:31,373,458-31,378,407 | + | C1H1g21043 | CX1g002338 | LOC_Os01g61250 | Os01g0828300 | - | Detail |
| C2H1g26560 | 1:31,394,724-31,395,434 | + | C1H1g24363 | CX1g002824 | LOC_Os01g61320 | Os01g0829000 | - | Detail |
| C2H1g27474 | 1:31,399,855-31,400,907 | + | C1H1g13356 | CX1g002824 | LOC_Os01g61320 | Os01g0829000 | - | Detail |
| C2H1g01343 | 1:31,402,240-31,404,275 | - | C1H1g28117 | CX1g006348 | LOC_Os01g61330 | Os01g0829100 | - | Detail |
| C2H1g10105 | 1:31,426,677-31,429,272 | - | C1H1g13226 | CX1g004731 | LOC_Os01g61390 | Os01g0829900 | YSL18, OsYSL18, OsYs2 | Detail |
| C2H1g20100 | 1:31,430,041-31,433,045 | - | C1H1g03596 | CX1g005073 | LOC_Os01g61400 | Os01g0830000 | - | Detail |
| C2H1g21734 | 1:31,433,528-31,437,480 | + | C1H1g18571 | CX1g003481 | LOC_Os01g61410 | Os01g0830100 | - | Detail |
| C2H1g12646 | 1:31,443,757-31,445,088 | - | C1H1g21385 | - | LOC_Os01g61430 | Os01g0830300 | - | Detail |
| C2H1g17929 | 1:31,445,796-31,448,293 | - | C1H1g09065 | - | LOC_Os01g61430 | Os01g0830300 | - | Detail |
| C2H1g16914 | 1:31,450,417-31,452,447 | - | C1H1g27297 | CX1g003057 | LOC_Os01g61440 | Os01g0830500 | - | Detail |
| C2H1g20160 | 1:31,462,145-31,467,666 | + | C1H1g26608 | CX1g005544 | LOC_Os01g61460 | Os01g0830700 | - | Detail |
| C2H1g10096 | 1:31,488,728-31,492,162 | + | C1H1g29926 | CX1g003525 | LOC_Os01g61500 | Os01g0831200 | OsBAG4, EIP1 | Detail |
| C2H1g19797 | 1:31,492,305-31,494,887 | - | C1H1g29563 | CX1g003586 | LOC_Os01g61510 | Os01g0831300 | - | Detail |
| C2H1g10064 | 1:31,497,616-31,499,308 | - | C1H1g16875 | CX1g004163 | LOC_Os01g61550 | Os01g0831900 | - | Detail |
| C2H1g01874 | 1:31,501,534-31,504,554 | - | C1H1g09267 | CX1g006982 | LOC_Os01g61560 | Os01g0832000 | CDS5, OsCDS5 | Detail |
| C2H1g04373 | 1:31,506,151-31,507,944 | + | C1H1g18254 | CX1g004599 | LOC_Os01g61570 | Os01g0832100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005047 | 1:2,072,547-2,072,876 | - | C1H1g12945 | C2H1g20272 | LOC_Os01g06520 | Os01g0149700 | KINt1 | Detail |
| CX1g003624 | 1:2,078,822-2,079,019 | - | - | C2H1g14098 | - | - | - | Detail |
| CX1g000648 | 1:2,082,745-2,084,171 | - | - | - | - | - | - | Detail |
| CX1g003888 | 1:2,106,381-2,106,950 | + | C1H1g29078 | C2H1g24298 | LOC_Os01g05250 | Os01g0146200 | - | Detail |
| CX1g000323 | 1:2,166,179-2,170,094 | + | C1H1g18605 | C2H1g08018 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| CX1g005533 | 1:2,171,659-2,172,408 | - | - | - | - | Os01g0147250 | - | Detail |
| CX1g001325 | 1:2,171,941-2,174,602 | + | C1H1g08705 | C2H1g25573 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| CX1g006491 | 1:2,180,893-2,181,051 | + | - | - | - | - | - | Detail |
| CX1g003030 | 1:2,191,343-2,194,905 | - | C1H1g11928 | C2H1g25353 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| CX1g005120 | 1:2,202,349-2,205,877 | - | C1H1g17304 | C2H1g29480 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| CX1g006525 | 1:2,207,260-2,210,546 | - | C1H1g08404 | C2H1g30066 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| CX1g001423 | 1:2,216,430-2,228,307 | + | C1H1g03903 | C2H1g25150 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| CX1g005368 | 1:2,238,442-2,242,036 | - | - | C2H1g10498 | LOC_Os01g05620 | Os01g0149500 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59 | Detail |
| CX1g005739 | 1:2,243,300-2,243,761 | + | C1H1g09766 | C2H1g18971 | LOC_Os01g05630 | Os01g0149600 | H2B | Detail |
| CX1g006643 | 1:2,245,123-2,248,470 | - | C1H1g01144 | C2H1g06791 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| CX1g006502 | 1:2,256,318-2,260,166 | - | C1H1g17924 | C2H1g25044 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| CX1g002286 | 1:2,265,565-2,268,998 | - | C1H1g30008 | C2H1g00511 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| CX1g004862 | 1:2,269,565-2,270,509 | - | - | - | - | - | - | Detail |
| CX1g000079 | 1:2,271,984-2,274,513 | + | C1H1g15806 | C2H1g17834 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| CX1g000733 | 1:2,305,907-2,307,621 | + | - | C2H1g16876 | LOC_Os01g05790 | Os01g0151100 | - | Detail |