| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g14944 | 1:29,356,526-29,360,715 | - | C1H1g22465 | CX1g003899 | LOC_Os01g56880 | Os01g0776600 | - | Detail |
| C2H1g21701 | 1:29,363,840-29,366,165 | - | C1H1g00597 | CX1g000978 | LOC_Os01g56890 | Os01g0776700 | - | Detail |
| C2H1g20224 | 1:29,368,968-29,377,887 | + | C1H1g11210 | CX1g004792 | LOC_Os01g56910 | Os01g0777000 | - | Detail |
| C2H1g02819 | 1:29,386,134-29,391,285 | + | C1H1g12823 | CX1g004121 | LOC_Os01g56930 | Os01g0777200 | - | Detail |
| C2H1g01868 | 1:29,392,613-29,398,921 | + | C1H1g24617 | CX1g002623 | LOC_Os01g56940 | Os01g0777300 | OsEXO1 | Detail |
| C2H1g09096 | 1:29,399,396-29,400,996 | + | C1H1g21107 | CX1g005425 | LOC_Os01g56969 | Os01g0777400 | - | Detail |
| C2H1g05939 | 1:29,401,660-29,418,093 | - | C1H1g01416 | CX1g003121 | LOC_Os01g56980 | Os01g0777700 | - | Detail |
| C2H1g00497 | 1:29,421,425-29,424,992 | - | C1H1g17868 | CX1g001773 | LOC_Os01g56990 | Os01g0777800 | - | Detail |
| C2H1g10125 | 1:29,426,512-29,426,909 | + | C1H1g03573 | - | LOC_Os01g57004 | - | - | Detail |
| C2H1g03254 | 1:29,430,406-29,432,555 | + | C1H1g03573 | CX1g000485 | LOC_Os01g57020 | Os01g0778100 | - | Detail |
| C2H1g02451 | 1:29,435,223-29,435,429 | + | C1H1g21965 | - | LOC_Os01g57030 | - | - | Detail |
| C2H1g01479 | 1:29,437,177-29,439,233 | - | C1H1g29247 | CX1g004182 | LOC_Os01g57050 | Os01g0778500 | - | Detail |
| C2H1g17230 | 1:29,448,111-29,454,280 | + | C1H1g15889 | CX1g000574 | LOC_Os01g57066 | Os01g0778700 | - | Detail |
| C2H1g28934 | 1:29,455,491-29,468,372 | + | C1H1g04670 | CX1g003174 | LOC_Os01g57073 | Os01g0778800 | - | Detail |
| C2H1g28562 | 1:29,472,262-29,481,632 | + | C1H1g03962 | CX1g003351 | LOC_Os01g57082 | Os01g0779100 | - | Detail |
| C2H1g18551 | 1:29,487,443-29,497,623 | - | C1H1g04257 | CX1g001051 | LOC_Os01g57110 | Os01g0779400 | OsCHR706, CHR706, ALT1 | Detail |
| C2H1g09740 | 1:29,519,819-29,527,502 | + | C1H1g30935 | CX1g001431 | LOC_Os01g57210 | Os01g0780400 | OsKTN80c | Detail |
| C2H1g25105 | 1:29,528,359-29,533,397 | + | C1H1g29735 | CX1g005945 | LOC_Os01g57220 | Os01g0780500 | - | Detail |
| C2H1g26746 | 1:29,533,970-29,536,663 | - | C1H1g29464 | CX1g001177 | LOC_Os01g57230 | Os01g0780600 | - | Detail |
| C2H1g27245 | 1:29,541,645-29,545,918 | - | C1H1g11530 | CX1g001653 | LOC_Os01g57240 | Os01g0780800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005047 | 1:2,072,547-2,072,876 | - | C1H1g12945 | C2H1g20272 | LOC_Os01g06520 | Os01g0149700 | KINt1 | Detail |
| CX1g003624 | 1:2,078,822-2,079,019 | - | - | C2H1g14098 | - | - | - | Detail |
| CX1g000648 | 1:2,082,745-2,084,171 | - | - | - | - | - | - | Detail |
| CX1g003888 | 1:2,106,381-2,106,950 | + | C1H1g29078 | C2H1g24298 | LOC_Os01g05250 | Os01g0146200 | - | Detail |
| CX1g000323 | 1:2,166,179-2,170,094 | + | C1H1g18605 | C2H1g08018 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| CX1g005533 | 1:2,171,659-2,172,408 | - | - | - | - | Os01g0147250 | - | Detail |
| CX1g001325 | 1:2,171,941-2,174,602 | + | C1H1g08705 | C2H1g25573 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| CX1g006491 | 1:2,180,893-2,181,051 | + | - | - | - | - | - | Detail |
| CX1g003030 | 1:2,191,343-2,194,905 | - | C1H1g11928 | C2H1g25353 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| CX1g005120 | 1:2,202,349-2,205,877 | - | C1H1g17304 | C2H1g29480 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| CX1g006525 | 1:2,207,260-2,210,546 | - | C1H1g08404 | C2H1g30066 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| CX1g001423 | 1:2,216,430-2,228,307 | + | C1H1g03903 | C2H1g25150 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| CX1g005368 | 1:2,238,442-2,242,036 | - | - | C2H1g10498 | LOC_Os01g05620 | Os01g0149500 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59 | Detail |
| CX1g005739 | 1:2,243,300-2,243,761 | + | C1H1g09766 | C2H1g18971 | LOC_Os01g05630 | Os01g0149600 | H2B | Detail |
| CX1g006643 | 1:2,245,123-2,248,470 | - | C1H1g01144 | C2H1g06791 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| CX1g006502 | 1:2,256,318-2,260,166 | - | C1H1g17924 | C2H1g25044 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| CX1g002286 | 1:2,265,565-2,268,998 | - | C1H1g30008 | C2H1g00511 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| CX1g004862 | 1:2,269,565-2,270,509 | - | - | - | - | - | - | Detail |
| CX1g000079 | 1:2,271,984-2,274,513 | + | C1H1g15806 | C2H1g17834 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| CX1g000733 | 1:2,305,907-2,307,621 | + | - | C2H1g16876 | LOC_Os01g05790 | Os01g0151100 | - | Detail |