| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g11116 | 12:21,000,424-21,004,694 | - | C2H12g06875 | CX12g016823 | LOC_Os12g41590 | Os12g0609500 | OsHLT1 | Detail |
| C1H12g27342 | 12:21,008,094-21,009,071 | - | C2H12g04006 | CX12g016466 | LOC_Os12g41600 | Os12g0609600 | - | Detail |
| C1H12g18705 | 12:21,012,787-21,018,707 | + | C2H12g26465 | CX12g016254 | LOC_Os12g41620 | Os12g0609800 | - | Detail |
| C1H12g11038 | 12:21,019,149-21,020,012 | - | C2H12g18784 | CX12g017875 | LOC_Os12g41630 | Os12g0609900 | - | Detail |
| C1H12g11412 | 12:21,024,180-21,024,827 | + | C2H12g18848 | CX12g016797 | LOC_Os12g41640 | Os12g0610100 | - | Detail |
| C1H12g03466 | 12:21,028,825-21,032,073 | + | C2H12g22960 | CX12g016171 | LOC_Os12g41650 | Os12g0610200 | OsPIL11, OsbHLH102 | Detail |
| C1H12g24161 | 12:21,040,535-21,041,656 | - | C2H12g28172 | CX12g016406 | LOC_Os12g41660 | Os12g0610300 | - | Detail |
| C1H12g28659 | 12:21,047,027-21,052,558 | + | C2H12g13640 | CX12g018004 | LOC_Os12g41670 | Os12g0610500 | - | Detail |
| C1H12g22847 | 12:21,059,175-21,059,828 | + | C2H12g12256 | CX12g015188 | LOC_Os12g41680 | Os12g0610600 | OMTN3, ONAC60 | Detail |
| C1H12g07462 | 12:21,062,259-21,064,609 | + | C2H12g26834 | CX12g015188 | LOC_Os12g41680 | Os12g0610600 | OMTN3, ONAC60 | Detail |
| C1H12g08761 | 12:21,066,320-21,067,651 | - | C2H12g21799 | CX12g015931 | LOC_Os12g41690 | Os12g0610800 | - | Detail |
| C1H12g14482 | 12:21,070,660-21,073,909 | - | C2H12g21772 | - | LOC_Os12g41700 | Os12g0611000 | - | Detail |
| C1H12g15132 | 12:21,075,851-21,078,215 | - | C2H12g20032 | CX12g017597 | LOC_Os12g41710 | Os12g0574700 | - | Detail |
| C1H12g26945 | 12:21,083,216-21,087,520 | - | C2H12g22290 | CX12g015642 | LOC_Os12g41715 | Os12g0611200 | - | Detail |
| C1H12g17196 | 12:21,093,301-21,094,966 | - | C2H12g06547 | CX12g016555 | LOC_Os12g41720 | Os12g0611300 | - | Detail |
| C1H12g13562 | 12:21,112,580-21,112,774 | - | C2H12g29304 | CX12g017804 | LOC_Os12g41760 | Os12g0611700 | - | Detail |
| C1H12g25780 | 12:21,123,830-21,124,924 | + | C2H12g07880 | CX12g016407 | LOC_Os12g41780 | Os12g0611900 | - | Detail |
| C1H12g30675 | 12:21,128,112-21,132,183 | - | C2H12g27565 | CX12g017674 | LOC_Os12g41800 | Os12g0612100 | - | Detail |
| C1H12g18919 | 12:21,133,262-21,137,426 | - | C2H12g13199 | CX12g015260 | LOC_Os12g41810 | Os12g0612300 | - | Detail |
| C1H12g01538 | 12:21,141,081-21,147,192 | - | C2H12g21257 | CX12g016874 | LOC_Os12g41820 | Os12g0612400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005047 | 1:2,072,547-2,072,876 | - | C1H1g12945 | C2H1g20272 | LOC_Os01g06520 | Os01g0149700 | KINt1 | Detail |
| CX1g003624 | 1:2,078,822-2,079,019 | - | - | C2H1g14098 | - | - | - | Detail |
| CX1g000648 | 1:2,082,745-2,084,171 | - | - | - | - | - | - | Detail |
| CX1g003888 | 1:2,106,381-2,106,950 | + | C1H1g29078 | C2H1g24298 | LOC_Os01g05250 | Os01g0146200 | - | Detail |
| CX1g000323 | 1:2,166,179-2,170,094 | + | C1H1g18605 | C2H1g08018 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| CX1g005533 | 1:2,171,659-2,172,408 | - | - | - | - | Os01g0147250 | - | Detail |
| CX1g001325 | 1:2,171,941-2,174,602 | + | C1H1g08705 | C2H1g25573 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| CX1g006491 | 1:2,180,893-2,181,051 | + | - | - | - | - | - | Detail |
| CX1g003030 | 1:2,191,343-2,194,905 | - | C1H1g11928 | C2H1g25353 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| CX1g005120 | 1:2,202,349-2,205,877 | - | C1H1g17304 | C2H1g29480 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| CX1g006525 | 1:2,207,260-2,210,546 | - | C1H1g08404 | C2H1g30066 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| CX1g001423 | 1:2,216,430-2,228,307 | + | C1H1g03903 | C2H1g25150 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| CX1g005368 | 1:2,238,442-2,242,036 | - | - | C2H1g10498 | LOC_Os01g05620 | Os01g0149500 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59 | Detail |
| CX1g005739 | 1:2,243,300-2,243,761 | + | C1H1g09766 | C2H1g18971 | LOC_Os01g05630 | Os01g0149600 | H2B | Detail |
| CX1g006643 | 1:2,245,123-2,248,470 | - | C1H1g01144 | C2H1g06791 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| CX1g006502 | 1:2,256,318-2,260,166 | - | C1H1g17924 | C2H1g25044 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| CX1g002286 | 1:2,265,565-2,268,998 | - | C1H1g30008 | C2H1g00511 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| CX1g004862 | 1:2,269,565-2,270,509 | - | - | - | - | - | - | Detail |
| CX1g000079 | 1:2,271,984-2,274,513 | + | C1H1g15806 | C2H1g17834 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| CX1g000733 | 1:2,305,907-2,307,621 | + | - | C2H1g16876 | LOC_Os01g05790 | Os01g0151100 | - | Detail |