| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g00369 | 12:19,354,620-19,360,581 | - | C2H12g06115 | CX12g015574 | LOC_Os12g38870 | Os12g0577800 | - | Detail |
| C1H12g31425 | 12:19,374,381-19,376,210 | - | C2H12g21149 | CX12g017526 | LOC_Os12g38880 | Os12g0578000 | - | Detail |
| C1H12g00225 | 12:19,376,915-19,378,194 | + | C2H12g11743 | CX12g015487 | - | Os12g0530100 | - | Detail |
| C1H12g07574 | 12:19,379,932-19,380,249 | + | C2H12g17013 | CX12g016002 | LOC_Os12g38900 | Os12g0578200 | - | Detail |
| C1H12g19103 | 12:19,381,720-19,385,408 | + | C2H12g17013 | CX12g016002 | LOC_Os12g38900 | Os12g0578200 | - | Detail |
| C1H12g25977 | 12:19,387,564-19,391,909 | + | C2H12g27102 | CX12g018018 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| C1H12g22422 | 12:19,392,439-19,396,688 | + | C2H12g06963 | CX12g017088 | LOC_Os12g38920 | Os12g0578400 | - | Detail |
| C1H12g15232 | 12:19,396,957-19,402,614 | - | C2H12g18495 | CX12g016623 | LOC_Os12g38930 | Os12g0578500 | - | Detail |
| C1H12g27740 | 12:19,406,048-19,407,130 | - | C2H12g09933 | CX12g015550 | LOC_Os12g38940 | Os12g0578600 | - | Detail |
| C1H12g14974 | 12:19,408,352-19,411,416 | - | C2H12g24390 | CX12g017948 | LOC_Os12g38950 | Os12g0578700 | - | Detail |
| C1H12g25491 | 12:19,412,610-19,414,410 | - | C2H12g12642 | CX12g015244 | LOC_Os12g38960 | Os12g0578800 | - | Detail |
| C1H12g15483 | 12:19,414,439-19,418,577 | - | C2H12g12388 | CX12g015244 | - | Os12g0578800 | - | Detail |
| C1H12g24155 | 12:19,419,502-19,427,043 | + | C2H12g19638 | CX12g015548 | LOC_Os12g38970 | Os12g0579000 | - | Detail |
| C1H12g27589 | 12:19,435,956-19,436,888 | + | C2H12g16465 | CX12g018664 | LOC_Os12g38990 | - | - | Detail |
| C1H12g05491 | 12:19,447,956-19,448,261 | - | - | - | - | - | - | Detail |
| C1H12g03006 | 12:19,470,952-19,475,441 | + | C2H12g28724 | CX12g016764 | LOC_Os12g39070 | Os12g0580300 | - | Detail |
| C1H12g30686 | 12:19,477,352-19,478,824 | + | C2H12g30550 | CX12g017525 | LOC_Os12g39080 | Os12g0580400 | OsPUT2 | Detail |
| C1H12g30608 | 12:19,482,872-19,485,160 | + | C2H12g19451 | CX12g016465 | LOC_Os12g39090 | Os12g0580500 | - | Detail |
| C1H12g26597 | 12:19,490,812-19,491,536 | + | C2H12g07749 | CX12g016924 | LOC_Os12g39100 | Os12g0580600 | - | Detail |
| C1H12g12444 | 12:19,496,723-19,499,216 | + | C2H12g07534 | CX12g017133 | LOC_Os12g39110 | Os12g0580700 | OsAIR4, OsAIR4.1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005047 | 1:2,072,547-2,072,876 | - | C1H1g12945 | C2H1g20272 | LOC_Os01g06520 | Os01g0149700 | KINt1 | Detail |
| CX1g003624 | 1:2,078,822-2,079,019 | - | - | C2H1g14098 | - | - | - | Detail |
| CX1g000648 | 1:2,082,745-2,084,171 | - | - | - | - | - | - | Detail |
| CX1g003888 | 1:2,106,381-2,106,950 | + | C1H1g29078 | C2H1g24298 | LOC_Os01g05250 | Os01g0146200 | - | Detail |
| CX1g000323 | 1:2,166,179-2,170,094 | + | C1H1g18605 | C2H1g08018 | LOC_Os01g05420 | Os01g0147200 | - | Detail |
| CX1g005533 | 1:2,171,659-2,172,408 | - | - | - | - | Os01g0147250 | - | Detail |
| CX1g001325 | 1:2,171,941-2,174,602 | + | C1H1g08705 | C2H1g25573 | LOC_Os01g05430 | Os01g0147300 | - | Detail |
| CX1g006491 | 1:2,180,893-2,181,051 | + | - | - | - | - | - | Detail |
| CX1g003030 | 1:2,191,343-2,194,905 | - | C1H1g11928 | C2H1g25353 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| CX1g005120 | 1:2,202,349-2,205,877 | - | C1H1g17304 | C2H1g29480 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| CX1g006525 | 1:2,207,260-2,210,546 | - | C1H1g08404 | C2H1g30066 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| CX1g001423 | 1:2,216,430-2,228,307 | + | C1H1g03903 | C2H1g25150 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| CX1g005368 | 1:2,238,442-2,242,036 | - | - | C2H1g10498 | LOC_Os01g05620 | Os01g0149500 | PIT, Pit, Pit(K59), Pit(Npb), Pi-t, PitNpb, PitK59 | Detail |
| CX1g005739 | 1:2,243,300-2,243,761 | + | C1H1g09766 | C2H1g18971 | LOC_Os01g05630 | Os01g0149600 | H2B | Detail |
| CX1g006643 | 1:2,245,123-2,248,470 | - | C1H1g01144 | C2H1g06791 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| CX1g006502 | 1:2,256,318-2,260,166 | - | C1H1g17924 | C2H1g25044 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| CX1g002286 | 1:2,265,565-2,268,998 | - | C1H1g30008 | C2H1g00511 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| CX1g004862 | 1:2,269,565-2,270,509 | - | - | - | - | - | - | Detail |
| CX1g000079 | 1:2,271,984-2,274,513 | + | C1H1g15806 | C2H1g17834 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| CX1g000733 | 1:2,305,907-2,307,621 | + | - | C2H1g16876 | LOC_Os01g05790 | Os01g0151100 | - | Detail |