| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g28905 | 5:9,107,917-9,109,364 | - | C1H5g26341 | CX5g040110 | LOC_Os05g19570 | Os05g0276500 | OsEXPA3 | Detail |
| C2H5g07930 | 5:9,137,558-9,138,574 | - | C1H5g09212 | CX5g038660 | LOC_Os05g19600 | Os05g0277000 | - | Detail |
| C2H5g03374 | 5:9,157,292-9,159,827 | - | C1H5g06044 | CX5g040958 | LOC_Os05g19630 | Os05g0277300 | - | Detail |
| C2H5g20956 | 5:9,186,603-9,187,349 | + | C1H5g02530 | CX5g038137 | LOC_Os05g19670 | Os05g0277500 | - | Detail |
| C2H5g25018 | 5:9,249,128-9,255,855 | - | C1H5g11498 | CX5g037933 | LOC_Os05g19910 | Os05g0278500 | OsFMT, OsFMT1, OsAT5, OsAT5/OsFMT | Detail |
| C2H5g00557 | 5:9,270,807-9,271,806 | - | - | CX5g039844 | - | - | - | Detail |
| C2H5g28009 | 5:9,282,859-9,290,634 | - | C1H5g29704 | CX5g039281 | LOC_Os05g19954 | Os05g0279300 | - | Detail |
| C2H5g12080 | 5:9,309,446-9,315,430 | + | C1H5g23736 | CX5g037702 | LOC_Os05g19970 | Os05g0279400 | - | Detail |
| C2H5g08718 | 5:9,320,458-9,330,009 | + | C1H5g23078 | CX5g039549 | LOC_Os05g19974 | Os05g0279600 | - | Detail |
| C2H5g23273 | 5:9,337,131-9,340,143 | + | C1H5g13096 | CX5g039172 | LOC_Os05g20020 | Os05g0279900 | - | Detail |
| C2H5g01527 | 5:9,411,485-9,413,024 | + | C1H5g25005 | CX5g040064 | LOC_Os05g20050 | Os05g0280200 | - | Detail |
| C2H5g23868 | 5:9,415,022-9,418,946 | - | C1H5g28156 | CX5g039890 | - | Os05g0480700 | - | Detail |
| C2H5g28478 | 5:9,448,522-9,451,356 | - | C1H5g26284 | CX5g038222 | LOC_Os05g20100 | Os05g0280500 | - | Detail |
| C2H5g04863 | 5:9,476,010-9,478,803 | - | - | CX5g039194 | - | - | - | Detail |
| C2H5g21904 | 5:9,484,936-9,486,894 | + | - | - | - | - | - | Detail |
| C2H5g02247 | 5:9,509,517-9,509,885 | - | C1H5g03157 | CX5g038694 | LOC_Os05g20420 | - | - | Detail |
| C2H5g18533 | 5:9,522,507-9,524,670 | - | C1H5g05125 | - | - | - | - | Detail |
| C2H5g23953 | 5:9,530,132-9,530,514 | - | C1H5g08577 | - | - | Os02g0216200 | - | Detail |
| C2H5g14404 | 5:10,011,667-10,016,243 | - | C1H5g05724 | CX5g036941 | LOC_Os05g21180 | Os05g0287800 | OsIPCS3 | Detail |
| C2H5g08960 | 5:10,306,871-10,307,263 | + | C1H5g04296 | CX5g039313 | - | Os05g0289100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044897 | 6:22,390,660-22,393,500 | - | C1H6g18504 | C2H6g22536 | LOC_Os06g42860 | Os06g0635300 | - | Detail |
| CX6g043700 | 6:22,401,223-22,409,556 | + | C1H6g13923 | C2H6g23938 | LOC_Os06g42920 | Os06g0635700 | - | Detail |
| CX6g043865 | 6:22,444,169-22,449,324 | - | C1H6g12692 | C2H6g12599 | LOC_Os06g43020 | - | - | Detail |
| CX6g045587 | 6:22,453,666-22,455,406 | + | C1H6g02107 | C2H6g29176 | LOC_Os06g43030 | Os06g0636600 | - | Detail |
| CX6g044743 | 6:22,455,801-22,461,238 | - | C1H6g24093 | C2H6g06703 | LOC_Os06g43044 | Os06g0636700 | - | Detail |
| CX6g044201 | 6:22,465,020-22,465,304 | + | C1H6g23162 | - | LOC_Os06g43060 | Os06g0636800 | - | Detail |
| CX6g045013 | 6:22,476,381-22,476,653 | + | C1H6g28467 | - | LOC_Os06g43080 | Os06g0637400 | - | Detail |
| CX6g042052 | 6:22,481,154-22,482,071 | - | C1H6g17323 | C2H6g19267 | LOC_Os06g43090 | Os06g0637500 | OsMYB102 | Detail |
| CX6g045897 | 6:22,487,620-22,487,889 | - | - | - | - | - | - | Detail |
| CX6g041295 | 6:22,492,067-22,500,657 | + | C1H6g07414 | C2H6g04365 | LOC_Os06g43120 | Os06g0638000 | DCM1, SAW1 | Detail |
| CX6g043646 | 6:22,501,569-22,503,869 | - | C1H6g14070 | C2H6g21383 | LOC_Os06g43130 | Os06g0638100 | - | Detail |
| CX6g042984 | 6:22,505,218-22,505,696 | + | C1H6g15076 | C2H6g12194 | LOC_Os06g43140 | - | - | Detail |
| CX6g043041 | 6:22,506,408-22,507,951 | + | C1H6g15076 | C2H6g12194 | LOC_Os06g43140 | Os06g0638200 | - | Detail |
| CX6g045128 | 6:22,508,768-22,510,723 | + | C1H6g23374 | C2H6g27140 | LOC_Os06g43160 | Os06g0638300 | - | Detail |
| CX6g041859 | 6:22,514,371-22,517,544 | - | C1H6g17822 | C2H6g10687 | LOC_Os06g43170 | Os06g0638500 | - | Detail |
| CX6g041826 | 6:22,524,374-22,525,257 | - | C1H6g05318 | C2H6g18024 | - | - | - | Detail |
| CX6g042320 | 6:22,528,147-22,531,044 | - | C1H6g26104 | C2H6g22491 | LOC_Os06g43180 | Os06g0638700 | - | Detail |
| CX6g041166 | 6:22,531,750-22,534,943 | - | C1H6g26964 | C2H6g22868 | LOC_Os06g43190 | Os06g0638900 | - | Detail |
| CX6g044414 | 6:22,536,440-22,543,043 | - | C1H6g05255 | C2H6g23425 | LOC_Os06g43210 | Os06g0639100 | - | Detail |
| CX6g044925 | 6:22,544,712-22,545,149 | + | - | - | LOC_Os06g42210 | - | - | Detail |