| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13446 | 3:15,441,855-15,444,790 | + | C2H3g28547 | CX3g026824 | LOC_Os03g29810 | Os03g0411500 | VYL, OsClpP6, ClpP6, CLP6 | Detail |
| C1H3g17384 | 3:15,446,063-15,447,888 | + | C2H3g05086 | CX3g028485 | LOC_Os03g29830 | Os03g0411600 | - | Detail |
| C1H3g16278 | 3:15,454,788-15,458,812 | - | C2H3g03300 | CX3g026254 | LOC_Os03g29850 | Os03g0411800 | - | Detail |
| C1H3g01152 | 3:15,493,558-15,497,840 | + | C2H3g18598 | CX3g025249 | LOC_Os03g29910 | Os03g0412200 | - | Detail |
| C1H3g29513 | 3:15,504,089-15,505,016 | + | C2H3g25598 | CX3g027118 | LOC_Os03g29920 | Os03g0412300 | - | Detail |
| C1H3g14020 | 3:15,509,912-15,510,796 | - | C2H3g13302 | CX3g026464 | LOC_Os03g29930 | Os03g0412400 | - | Detail |
| C1H3g23937 | 3:15,529,629-15,536,720 | + | C2H3g28011 | CX3g026817 | LOC_Os03g29950 | Os03g0412800 | - | Detail |
| C1H3g13193 | 3:15,550,436-15,557,135 | + | C2H3g06222 | CX3g030482 | LOC_Os03g29960 | Os03g0412900 | - | Detail |
| C1H3g10486 | 3:15,568,207-15,572,329 | + | C2H3g21811 | CX3g029713 | LOC_Os03g29980 | Os03g0413100 | - | Detail |
| C1H3g17935 | 3:15,580,436-15,586,269 | - | C2H3g29744 | CX3g028183 | LOC_Os03g30000 | Os03g0413400 | - | Detail |
| C1H3g29820 | 3:15,619,439-15,620,660 | + | - | - | - | Os03g0414200 | - | Detail |
| C1H3g00999 | 3:15,637,124-15,638,153 | - | - | CX3g027342 | LOC_Os03g30092 | Os03g0414400 | OsHCF222 | Detail |
| C1H3g09941 | 3:15,669,135-15,669,926 | + | C2H3g13977 | CX3g026035 | LOC_Os03g30120 | Os03g0414900 | - | Detail |
| C1H3g17098 | 3:15,678,936-15,682,018 | - | C2H3g10779 | CX3g031360 | LOC_Os03g30130 | Os03g0415200 | - | Detail |
| C1H3g25399 | 3:15,692,516-15,692,890 | + | C2H3g22648 | - | - | - | - | Detail |
| C1H3g19128 | 3:15,693,759-15,694,121 | + | C2H3g22648 | CX3g028346 | LOC_Os03g30220 | Os03g0415600 | - | Detail |
| C1H3g23999 | 3:15,694,401-15,695,009 | + | C2H3g22648 | CX3g028346 | LOC_Os03g30220 | Os03g0415700 | - | Detail |
| C1H3g25355 | 3:15,705,622-15,707,536 | + | C2H3g10116 | CX3g025881 | LOC_Os03g30250 | Os03g0416200 | - | Detail |
| C1H3g20080 | 3:15,707,813-15,711,121 | - | C2H3g04729 | CX3g027193 | LOC_Os03g30260 | Os03g0416300 | OsBC1L2 | Detail |
| C1H3g12535 | 3:15,723,016-15,727,423 | - | C2H3g26266 | CX3g030769 | LOC_Os03g30300 | Os03g0416500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX6g044897 | 6:22,390,660-22,393,500 | - | C1H6g18504 | C2H6g22536 | LOC_Os06g42860 | Os06g0635300 | - | Detail |
| CX6g043700 | 6:22,401,223-22,409,556 | + | C1H6g13923 | C2H6g23938 | LOC_Os06g42920 | Os06g0635700 | - | Detail |
| CX6g043865 | 6:22,444,169-22,449,324 | - | C1H6g12692 | C2H6g12599 | LOC_Os06g43020 | - | - | Detail |
| CX6g045587 | 6:22,453,666-22,455,406 | + | C1H6g02107 | C2H6g29176 | LOC_Os06g43030 | Os06g0636600 | - | Detail |
| CX6g044743 | 6:22,455,801-22,461,238 | - | C1H6g24093 | C2H6g06703 | LOC_Os06g43044 | Os06g0636700 | - | Detail |
| CX6g044201 | 6:22,465,020-22,465,304 | + | C1H6g23162 | - | LOC_Os06g43060 | Os06g0636800 | - | Detail |
| CX6g045013 | 6:22,476,381-22,476,653 | + | C1H6g28467 | - | LOC_Os06g43080 | Os06g0637400 | - | Detail |
| CX6g042052 | 6:22,481,154-22,482,071 | - | C1H6g17323 | C2H6g19267 | LOC_Os06g43090 | Os06g0637500 | OsMYB102 | Detail |
| CX6g045897 | 6:22,487,620-22,487,889 | - | - | - | - | - | - | Detail |
| CX6g041295 | 6:22,492,067-22,500,657 | + | C1H6g07414 | C2H6g04365 | LOC_Os06g43120 | Os06g0638000 | DCM1, SAW1 | Detail |
| CX6g043646 | 6:22,501,569-22,503,869 | - | C1H6g14070 | C2H6g21383 | LOC_Os06g43130 | Os06g0638100 | - | Detail |
| CX6g042984 | 6:22,505,218-22,505,696 | + | C1H6g15076 | C2H6g12194 | LOC_Os06g43140 | - | - | Detail |
| CX6g043041 | 6:22,506,408-22,507,951 | + | C1H6g15076 | C2H6g12194 | LOC_Os06g43140 | Os06g0638200 | - | Detail |
| CX6g045128 | 6:22,508,768-22,510,723 | + | C1H6g23374 | C2H6g27140 | LOC_Os06g43160 | Os06g0638300 | - | Detail |
| CX6g041859 | 6:22,514,371-22,517,544 | - | C1H6g17822 | C2H6g10687 | LOC_Os06g43170 | Os06g0638500 | - | Detail |
| CX6g041826 | 6:22,524,374-22,525,257 | - | C1H6g05318 | C2H6g18024 | - | - | - | Detail |
| CX6g042320 | 6:22,528,147-22,531,044 | - | C1H6g26104 | C2H6g22491 | LOC_Os06g43180 | Os06g0638700 | - | Detail |
| CX6g041166 | 6:22,531,750-22,534,943 | - | C1H6g26964 | C2H6g22868 | LOC_Os06g43190 | Os06g0638900 | - | Detail |
| CX6g044414 | 6:22,536,440-22,543,043 | - | C1H6g05255 | C2H6g23425 | LOC_Os06g43210 | Os06g0639100 | - | Detail |
| CX6g044925 | 6:22,544,712-22,545,149 | + | - | - | LOC_Os06g42210 | - | - | Detail |